Protein–RNA interactions for Protein: O54907

Tnfsf12, Tumor necrosis factor ligand superfamily member 12, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf12O54907 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfsf12O54907 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.33■□□□□ 0.04
Tnfsf12O54907 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.33■□□□□ 0.04
Tnfsf12O54907 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.33■□□□□ 0.04
Tnfsf12O54907 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfsf12O54907 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfsf12O54907 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfsf12O54907 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Tnfsf12O54907 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfsf12O54907 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfsf12O54907 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfsf12O54907 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Tnfsf12O54907 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfsf12O54907 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.32■□□□□ 0.04
Tnfsf12O54907 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.32■□□□□ 0.04
Tnfsf12O54907 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfsf12O54907 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfsf12O54907 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.32■□□□□ 0.04
Tnfsf12O54907 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfsf12O54907 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfsf12O54907 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfsf12O54907 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfsf12O54907 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.31■□□□□ 0.04
Tnfsf12O54907 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfsf12O54907 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfsf12O54907 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfsf12O54907 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Tnfsf12O54907 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Tnfsf12O54907 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfsf12O54907 Gm7860-201ENSMUST00000121190 879 ntBASIC15.31■□□□□ 0.04
Tnfsf12O54907 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfsf12O54907 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.31■□□□□ 0.04
Tnfsf12O54907 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Tnfsf12O54907 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfsf12O54907 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.31■□□□□ 0.04
Tnfsf12O54907 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfsf12O54907 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.31■□□□□ 0.04
Tnfsf12O54907 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfsf12O54907 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Tnfsf12O54907 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.31■□□□□ 0.04
Tnfsf12O54907 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Tnfsf12O54907 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfsf12O54907 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Tnfsf12O54907 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfsf12O54907 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfsf12O54907 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Tnfsf12O54907 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfsf12O54907 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfsf12O54907 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfsf12O54907 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfsf12O54907 BC021767-201ENSMUST00000126387 1716 ntBASIC15.3■□□□□ 0.04
Tnfsf12O54907 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfsf12O54907 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Tnfsf12O54907 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfsf12O54907 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Tnfsf12O54907 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfsf12O54907 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfsf12O54907 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfsf12O54907 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Tnfsf12O54907 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfsf12O54907 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Tnfsf12O54907 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfsf12O54907 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.3■□□□□ 0.04
Tnfsf12O54907 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.3■□□□□ 0.04
Tnfsf12O54907 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfsf12O54907 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfsf12O54907 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfsf12O54907 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfsf12O54907 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfsf12O54907 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfsf12O54907 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfsf12O54907 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfsf12O54907 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Tnfsf12O54907 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfsf12O54907 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms