Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clk3O35492 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clk3O35492 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clk3O35492 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clk3O35492 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.74■□□□□ 0.43
Clk3O35492 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clk3O35492 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clk3O35492 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Clk3O35492 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clk3O35492 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clk3O35492 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clk3O35492 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clk3O35492 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clk3O35492 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clk3O35492 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clk3O35492 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clk3O35492 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clk3O35492 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clk3O35492 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.73■□□□□ 0.43
Clk3O35492 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clk3O35492 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.73■□□□□ 0.43
Clk3O35492 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clk3O35492 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Clk3O35492 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Clk3O35492 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clk3O35492 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clk3O35492 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clk3O35492 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.73■□□□□ 0.43
Clk3O35492 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.73■□□□□ 0.43
Clk3O35492 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clk3O35492 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.72■□□□□ 0.43
Clk3O35492 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clk3O35492 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clk3O35492 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clk3O35492 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clk3O35492 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clk3O35492 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Clk3O35492 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Clk3O35492 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clk3O35492 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clk3O35492 Gm43060-201ENSMUST00000200621 289 ntBASIC17.72■□□□□ 0.43
Clk3O35492 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clk3O35492 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.72■□□□□ 0.43
Clk3O35492 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.72■□□□□ 0.43
Clk3O35492 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clk3O35492 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clk3O35492 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clk3O35492 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clk3O35492 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clk3O35492 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clk3O35492 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clk3O35492 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Clk3O35492 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clk3O35492 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clk3O35492 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.71■□□□□ 0.43
Clk3O35492 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.71■□□□□ 0.43
Clk3O35492 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.71■□□□□ 0.43
Clk3O35492 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.71■□□□□ 0.43
Clk3O35492 Gm40848-201ENSMUST00000221998 324 ntBASIC17.71■□□□□ 0.43
Clk3O35492 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Clk3O35492 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.71■□□□□ 0.43
Clk3O35492 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Clk3O35492 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Clk3O35492 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Clk3O35492 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Clk3O35492 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Clk3O35492 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Clk3O35492 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Clk3O35492 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clk3O35492 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Clk3O35492 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clk3O35492 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Clk3O35492 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clk3O35492 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Clk3O35492 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.7■□□□□ 0.42
Clk3O35492 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clk3O35492 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Clk3O35492 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clk3O35492 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.7■□□□□ 0.42
Clk3O35492 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clk3O35492 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clk3O35492 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clk3O35492 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Clk3O35492 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Clk3O35492 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clk3O35492 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clk3O35492 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clk3O35492 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Clk3O35492 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clk3O35492 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clk3O35492 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clk3O35492 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clk3O35492 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clk3O35492 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clk3O35492 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Clk3O35492 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clk3O35492 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Clk3O35492 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Clk3O35492 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clk3O35492 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms