Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trove2O08848 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trove2O08848 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trove2O08848 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trove2O08848 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.12■□□□□ 0.65
Trove2O08848 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trove2O08848 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trove2O08848 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trove2O08848 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.12■□□□□ 0.65
Trove2O08848 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.12■□□□□ 0.65
Trove2O08848 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.12■□□□□ 0.65
Trove2O08848 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trove2O08848 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trove2O08848 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trove2O08848 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trove2O08848 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trove2O08848 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Trove2O08848 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trove2O08848 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Trove2O08848 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Trove2O08848 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trove2O08848 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trove2O08848 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trove2O08848 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trove2O08848 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trove2O08848 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trove2O08848 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.11■□□□□ 0.65
Trove2O08848 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trove2O08848 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trove2O08848 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Trove2O08848 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trove2O08848 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Trove2O08848 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trove2O08848 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trove2O08848 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trove2O08848 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Trove2O08848 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trove2O08848 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.1■□□□□ 0.65
Trove2O08848 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.1■□□□□ 0.65
Trove2O08848 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.1■□□□□ 0.65
Trove2O08848 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.1■□□□□ 0.65
Trove2O08848 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trove2O08848 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trove2O08848 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trove2O08848 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trove2O08848 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trove2O08848 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trove2O08848 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trove2O08848 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Trove2O08848 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.09■□□□□ 0.65
Trove2O08848 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trove2O08848 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Trove2O08848 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trove2O08848 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trove2O08848 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trove2O08848 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Trove2O08848 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trove2O08848 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trove2O08848 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trove2O08848 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trove2O08848 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trove2O08848 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trove2O08848 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trove2O08848 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trove2O08848 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trove2O08848 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trove2O08848 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Trove2O08848 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trove2O08848 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trove2O08848 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trove2O08848 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trove2O08848 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Trove2O08848 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Trove2O08848 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.07■□□□□ 0.64
Trove2O08848 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trove2O08848 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trove2O08848 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trove2O08848 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trove2O08848 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trove2O08848 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Trove2O08848 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trove2O08848 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trove2O08848 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.06■□□□□ 0.64
Trove2O08848 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trove2O08848 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Trove2O08848 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trove2O08848 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trove2O08848 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trove2O08848 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trove2O08848 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trove2O08848 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trove2O08848 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.06■□□□□ 0.64
Trove2O08848 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trove2O08848 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trove2O08848 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trove2O08848 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trove2O08848 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trove2O08848 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trove2O08848 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trove2O08848 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms