Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ebf3O08791 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ebf3O08791 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.36■□□□□ 0.69
Ebf3O08791 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ebf3O08791 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.36■□□□□ 0.69
Ebf3O08791 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ebf3O08791 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.36■□□□□ 0.69
Ebf3O08791 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ebf3O08791 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ebf3O08791 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ebf3O08791 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ebf3O08791 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ebf3O08791 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Ebf3O08791 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ebf3O08791 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ebf3O08791 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ebf3O08791 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ebf3O08791 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ebf3O08791 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.35■□□□□ 0.69
Ebf3O08791 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ebf3O08791 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.35■□□□□ 0.69
Ebf3O08791 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Ebf3O08791 Gm10812-201ENSMUST00000099864 546 ntBASIC19.35■□□□□ 0.69
Ebf3O08791 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ebf3O08791 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ebf3O08791 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ebf3O08791 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ebf3O08791 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ebf3O08791 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ebf3O08791 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ebf3O08791 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ebf3O08791 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.34■□□□□ 0.69
Ebf3O08791 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ebf3O08791 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ebf3O08791 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Ebf3O08791 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ebf3O08791 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ebf3O08791 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ebf3O08791 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ebf3O08791 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ebf3O08791 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ebf3O08791 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.33■□□□□ 0.68
Ebf3O08791 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ebf3O08791 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ebf3O08791 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ebf3O08791 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ebf3O08791 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ebf3O08791 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ebf3O08791 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.32■□□□□ 0.68
Ebf3O08791 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ebf3O08791 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.32■□□□□ 0.68
Ebf3O08791 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ebf3O08791 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ebf3O08791 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ebf3O08791 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ebf3O08791 Golph3-205ENSMUST00000228671 2842 ntBASIC19.32■□□□□ 0.68
Ebf3O08791 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ebf3O08791 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ebf3O08791 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ebf3O08791 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ebf3O08791 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ebf3O08791 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ebf3O08791 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ebf3O08791 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ebf3O08791 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ebf3O08791 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ebf3O08791 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ebf3O08791 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ebf3O08791 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.3■□□□□ 0.68
Ebf3O08791 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ebf3O08791 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ebf3O08791 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ebf3O08791 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ebf3O08791 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ebf3O08791 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Ebf3O08791 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ebf3O08791 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.3■□□□□ 0.68
Ebf3O08791 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
Ebf3O08791 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ebf3O08791 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ebf3O08791 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ebf3O08791 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ebf3O08791 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf3O08791 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf3O08791 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf3O08791 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ebf3O08791 Gm27275-201ENSMUST00000184318 272 ntBASIC19.28■□□□□ 0.68
Ebf3O08791 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf3O08791 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf3O08791 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf3O08791 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ebf3O08791 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf3O08791 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ebf3O08791 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ebf3O08791 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Ebf3O08791 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ebf3O08791 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ebf3O08791 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ebf3O08791 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ebf3O08791 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms