Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Raet1aO08602 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Raet1aO08602 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Raet1aO08602 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Raet1aO08602 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Raet1aO08602 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Raet1aO08602 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Raet1aO08602 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Raet1aO08602 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Raet1aO08602 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Raet1aO08602 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Raet1aO08602 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Raet1aO08602 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.55■□□□□ 0.24
Raet1aO08602 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Raet1aO08602 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Raet1aO08602 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Raet1aO08602 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Raet1aO08602 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.55■□□□□ 0.24
Raet1aO08602 Gm13146-201ENSMUST00000118508 780 ntBASIC16.55■□□□□ 0.24
Raet1aO08602 Gm13234-201ENSMUST00000120010 747 ntBASIC16.55■□□□□ 0.24
Raet1aO08602 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Raet1aO08602 Gm10493-201ENSMUST00000097270 612 ntBASIC16.55■□□□□ 0.24
Raet1aO08602 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Raet1aO08602 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Raet1aO08602 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Raet1aO08602 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Raet1aO08602 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Raet1aO08602 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Raet1aO08602 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.55■□□□□ 0.24
Raet1aO08602 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Raet1aO08602 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Raet1aO08602 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.55■□□□□ 0.24
Raet1aO08602 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Raet1aO08602 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Raet1aO08602 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Raet1aO08602 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Raet1aO08602 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Raet1aO08602 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Raet1aO08602 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Raet1aO08602 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Raet1aO08602 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Raet1aO08602 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Raet1aO08602 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Raet1aO08602 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Raet1aO08602 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Raet1aO08602 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Raet1aO08602 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Raet1aO08602 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Raet1aO08602 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Raet1aO08602 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Raet1aO08602 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Raet1aO08602 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Raet1aO08602 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Raet1aO08602 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Raet1aO08602 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.53■□□□□ 0.24
Raet1aO08602 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.53■□□□□ 0.24
Raet1aO08602 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.53■□□□□ 0.24
Raet1aO08602 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.53■□□□□ 0.24
Raet1aO08602 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Raet1aO08602 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Raet1aO08602 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Raet1aO08602 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Raet1aO08602 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Raet1aO08602 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Raet1aO08602 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Raet1aO08602 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Raet1aO08602 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.53■□□□□ 0.24
Raet1aO08602 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Raet1aO08602 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Raet1aO08602 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Raet1aO08602 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Raet1aO08602 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.52■□□□□ 0.24
Raet1aO08602 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Raet1aO08602 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Raet1aO08602 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Raet1aO08602 Gm42778-201ENSMUST00000199644 553 ntBASIC16.52■□□□□ 0.24
Raet1aO08602 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.52■□□□□ 0.24
Raet1aO08602 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Raet1aO08602 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Raet1aO08602 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Raet1aO08602 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.52■□□□□ 0.23
Raet1aO08602 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Raet1aO08602 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Raet1aO08602 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.51■□□□□ 0.23
Raet1aO08602 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Raet1aO08602 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Raet1aO08602 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Raet1aO08602 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Raet1aO08602 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.51■□□□□ 0.23
Raet1aO08602 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Raet1aO08602 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.51■□□□□ 0.23
Raet1aO08602 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Raet1aO08602 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Raet1aO08602 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Raet1aO08602 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Raet1aO08602 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Raet1aO08602 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Raet1aO08602 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Raet1aO08602 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Raet1aO08602 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms