Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.95■□□□□ 0.78
Usp35M0QWN7 Gm6420-201ENSMUST00000193885 723 ntBASIC19.95■□□□□ 0.78
Usp35M0QWN7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp35M0QWN7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp35M0QWN7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp35M0QWN7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Usp35M0QWN7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Usp35M0QWN7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp35M0QWN7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp35M0QWN7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp35M0QWN7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp35M0QWN7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.94■□□□□ 0.78
Usp35M0QWN7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp35M0QWN7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Usp35M0QWN7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Usp35M0QWN7 Gm6365-201ENSMUST00000054711 744 ntBASIC19.94■□□□□ 0.78
Usp35M0QWN7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Usp35M0QWN7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.94■□□□□ 0.78
Usp35M0QWN7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Usp35M0QWN7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp35M0QWN7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Usp35M0QWN7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp35M0QWN7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Usp35M0QWN7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp35M0QWN7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp35M0QWN7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp35M0QWN7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp35M0QWN7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp35M0QWN7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp35M0QWN7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.93■□□□□ 0.78
Usp35M0QWN7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp35M0QWN7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp35M0QWN7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.93■□□□□ 0.78
Usp35M0QWN7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp35M0QWN7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp35M0QWN7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp35M0QWN7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp35M0QWN7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.92■□□□□ 0.78
Usp35M0QWN7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp35M0QWN7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp35M0QWN7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
Usp35M0QWN7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp35M0QWN7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp35M0QWN7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Usp35M0QWN7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
Usp35M0QWN7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Usp35M0QWN7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp35M0QWN7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.91■□□□□ 0.78
Usp35M0QWN7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Usp35M0QWN7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp35M0QWN7 Gm13148-201ENSMUST00000118892 745 ntBASIC19.91■□□□□ 0.78
Usp35M0QWN7 Nespas-201ENSMUST00000143738 1083 ntBASIC19.91■□□□□ 0.78
Usp35M0QWN7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.91■□□□□ 0.78
Usp35M0QWN7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp35M0QWN7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp35M0QWN7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Usp35M0QWN7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Usp35M0QWN7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp35M0QWN7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp35M0QWN7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.9■□□□□ 0.78
Usp35M0QWN7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Usp35M0QWN7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp35M0QWN7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp35M0QWN7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp35M0QWN7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Usp35M0QWN7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Usp35M0QWN7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp35M0QWN7 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.9■□□□□ 0.78
Usp35M0QWN7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Usp35M0QWN7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp35M0QWN7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp35M0QWN7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp35M0QWN7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp35M0QWN7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Usp35M0QWN7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.89■□□□□ 0.77
Usp35M0QWN7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp35M0QWN7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp35M0QWN7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp35M0QWN7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.88■□□□□ 0.77
Usp35M0QWN7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Usp35M0QWN7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp35M0QWN7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp35M0QWN7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp35M0QWN7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.88■□□□□ 0.77
Usp35M0QWN7 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Usp35M0QWN7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.88■□□□□ 0.77
Usp35M0QWN7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Usp35M0QWN7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Usp35M0QWN7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp35M0QWN7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Usp35M0QWN7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp35M0QWN7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Usp35M0QWN7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.87■□□□□ 0.77
Usp35M0QWN7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp35M0QWN7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp35M0QWN7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp35M0QWN7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.87■□□□□ 0.77
Usp35M0QWN7 Gm10653-202ENSMUST00000139570 835 ntBASIC19.87■□□□□ 0.77
Usp35M0QWN7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.87■□□□□ 0.77
Usp35M0QWN7 Gm5408-201ENSMUST00000197998 747 ntBASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms