Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4lE9Q2N0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.85■□□□□ 0.13
Cpsf4lE9Q2N0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4lE9Q2N0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.85■□□□□ 0.13
Cpsf4lE9Q2N0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Cpsf4lE9Q2N0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4lE9Q2N0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4lE9Q2N0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf4lE9Q2N0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf4lE9Q2N0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf4lE9Q2N0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf4lE9Q2N0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf4lE9Q2N0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cpsf4lE9Q2N0 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.84■□□□□ 0.13
Cpsf4lE9Q2N0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf4lE9Q2N0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf4lE9Q2N0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.84■□□□□ 0.13
Cpsf4lE9Q2N0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Cpsf4lE9Q2N0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.84■□□□□ 0.13
Cpsf4lE9Q2N0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Cpsf4lE9Q2N0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf4lE9Q2N0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf4lE9Q2N0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf4lE9Q2N0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf4lE9Q2N0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf4lE9Q2N0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.84■□□□□ 0.13
Cpsf4lE9Q2N0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cpsf4lE9Q2N0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cpsf4lE9Q2N0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cpsf4lE9Q2N0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cpsf4lE9Q2N0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpsf4lE9Q2N0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpsf4lE9Q2N0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cpsf4lE9Q2N0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpsf4lE9Q2N0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpsf4lE9Q2N0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpsf4lE9Q2N0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.83■□□□□ 0.12
Cpsf4lE9Q2N0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpsf4lE9Q2N0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpsf4lE9Q2N0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cpsf4lE9Q2N0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpsf4lE9Q2N0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpsf4lE9Q2N0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cpsf4lE9Q2N0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.82■□□□□ 0.12
Cpsf4lE9Q2N0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.82■□□□□ 0.12
Cpsf4lE9Q2N0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpsf4lE9Q2N0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpsf4lE9Q2N0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cpsf4lE9Q2N0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.82■□□□□ 0.12
Cpsf4lE9Q2N0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cpsf4lE9Q2N0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpsf4lE9Q2N0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpsf4lE9Q2N0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpsf4lE9Q2N0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Cpsf4lE9Q2N0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpsf4lE9Q2N0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpsf4lE9Q2N0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.81■□□□□ 0.12
Cpsf4lE9Q2N0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.81■□□□□ 0.12
Cpsf4lE9Q2N0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Cpsf4lE9Q2N0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.81■□□□□ 0.12
Cpsf4lE9Q2N0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpsf4lE9Q2N0 Gm27405-201ENSMUST00000184201 112 ntBASIC15.81■□□□□ 0.12
Cpsf4lE9Q2N0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.81■□□□□ 0.12
Cpsf4lE9Q2N0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpsf4lE9Q2N0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpsf4lE9Q2N0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Cpsf4lE9Q2N0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpsf4lE9Q2N0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpsf4lE9Q2N0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpsf4lE9Q2N0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cpsf4lE9Q2N0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.8■□□□□ 0.12
Cpsf4lE9Q2N0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4lE9Q2N0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cpsf4lE9Q2N0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4lE9Q2N0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4lE9Q2N0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.8■□□□□ 0.12
Cpsf4lE9Q2N0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4lE9Q2N0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.8■□□□□ 0.12
Cpsf4lE9Q2N0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4lE9Q2N0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4lE9Q2N0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4lE9Q2N0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.8■□□□□ 0.12
Cpsf4lE9Q2N0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4lE9Q2N0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cpsf4lE9Q2N0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4lE9Q2N0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.8■□□□□ 0.12
Cpsf4lE9Q2N0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4lE9Q2N0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.8■□□□□ 0.12
Cpsf4lE9Q2N0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Cpsf4lE9Q2N0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cpsf4lE9Q2N0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4lE9Q2N0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4lE9Q2N0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cpsf4lE9Q2N0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4lE9Q2N0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4lE9Q2N0 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.79■□□□□ 0.12
Cpsf4lE9Q2N0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4lE9Q2N0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4lE9Q2N0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf4lE9Q2N0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms