Protein–RNA interactions for Protein: C0HKE1

Hist1h2ab, Histone H2A type 1-B, mousemouse

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2abC0HKE1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h2abC0HKE1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Hist1h2abC0HKE1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h2abC0HKE1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h2abC0HKE1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Hist1h2abC0HKE1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Hist1h2abC0HKE1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.07■□□□□ 0.32
Hist1h2abC0HKE1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h2abC0HKE1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h2abC0HKE1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.07■□□□□ 0.32
Hist1h2abC0HKE1 Gm43017-201ENSMUST00000198296 752 ntBASIC17.07■□□□□ 0.32
Hist1h2abC0HKE1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Hist1h2abC0HKE1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h2abC0HKE1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h2abC0HKE1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h2abC0HKE1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h2abC0HKE1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Hist1h2abC0HKE1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h2abC0HKE1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h2abC0HKE1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h2abC0HKE1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h2abC0HKE1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Hist1h2abC0HKE1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h2abC0HKE1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h2abC0HKE1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h2abC0HKE1 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.06■□□□□ 0.32
Hist1h2abC0HKE1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h2abC0HKE1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Hist1h2abC0HKE1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Hist1h2abC0HKE1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Hist1h2abC0HKE1 Gm40848-201ENSMUST00000221998 324 ntBASIC17.06■□□□□ 0.32
Hist1h2abC0HKE1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Hist1h2abC0HKE1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Hist1h2abC0HKE1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h2abC0HKE1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h2abC0HKE1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h2abC0HKE1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h2abC0HKE1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h2abC0HKE1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h2abC0HKE1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h2abC0HKE1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h2abC0HKE1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h2abC0HKE1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hist1h2abC0HKE1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h2abC0HKE1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h2abC0HKE1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h2abC0HKE1 Golph3-205ENSMUST00000228671 2842 ntBASIC17.05■□□□□ 0.32
Hist1h2abC0HKE1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h2abC0HKE1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h2abC0HKE1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hist1h2abC0HKE1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h2abC0HKE1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h2abC0HKE1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h2abC0HKE1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h2abC0HKE1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h2abC0HKE1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hist1h2abC0HKE1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hist1h2abC0HKE1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hist1h2abC0HKE1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.04■□□□□ 0.32
Hist1h2abC0HKE1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hist1h2abC0HKE1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Hist1h2abC0HKE1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hist1h2abC0HKE1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Hist1h2abC0HKE1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.03■□□□□ 0.32
Hist1h2abC0HKE1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Hist1h2abC0HKE1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hist1h2abC0HKE1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hist1h2abC0HKE1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hist1h2abC0HKE1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hist1h2abC0HKE1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Hist1h2abC0HKE1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
Hist1h2abC0HKE1 Gm7860-201ENSMUST00000121190 879 ntBASIC17.03■□□□□ 0.32
Hist1h2abC0HKE1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Hist1h2abC0HKE1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Hist1h2abC0HKE1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hist1h2abC0HKE1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Hist1h2abC0HKE1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Hist1h2abC0HKE1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hist1h2abC0HKE1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hist1h2abC0HKE1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hist1h2abC0HKE1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Hist1h2abC0HKE1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hist1h2abC0HKE1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hist1h2abC0HKE1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hist1h2abC0HKE1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hist1h2abC0HKE1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Hist1h2abC0HKE1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hist1h2abC0HKE1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hist1h2abC0HKE1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
Hist1h2abC0HKE1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hist1h2abC0HKE1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hist1h2abC0HKE1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.02■□□□□ 0.32
Hist1h2abC0HKE1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.02■□□□□ 0.32
Hist1h2abC0HKE1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hist1h2abC0HKE1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.02■□□□□ 0.32
Hist1h2abC0HKE1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hist1h2abC0HKE1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hist1h2abC0HKE1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hist1h2abC0HKE1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Hist1h2abC0HKE1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms