Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn1aA2APX8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn1aA2APX8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scn1aA2APX8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scn1aA2APX8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scn1aA2APX8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn1aA2APX8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scn1aA2APX8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scn1aA2APX8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn1aA2APX8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Scn1aA2APX8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn1aA2APX8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.69■□□□□ 0.74
Scn1aA2APX8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn1aA2APX8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scn1aA2APX8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.69■□□□□ 0.74
Scn1aA2APX8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn1aA2APX8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn1aA2APX8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Scn1aA2APX8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Scn1aA2APX8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn1aA2APX8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.69■□□□□ 0.74
Scn1aA2APX8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn1aA2APX8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Scn1aA2APX8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scn1aA2APX8 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.69■□□□□ 0.74
Scn1aA2APX8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn1aA2APX8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn1aA2APX8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scn1aA2APX8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Scn1aA2APX8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.68■□□□□ 0.74
Scn1aA2APX8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.68■□□□□ 0.74
Scn1aA2APX8 Gm37856-201ENSMUST00000191634 999 ntBASIC19.68■□□□□ 0.74
Scn1aA2APX8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Scn1aA2APX8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn1aA2APX8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn1aA2APX8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Scn1aA2APX8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn1aA2APX8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn1aA2APX8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn1aA2APX8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Scn1aA2APX8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn1aA2APX8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scn1aA2APX8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn1aA2APX8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn1aA2APX8 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.67■□□□□ 0.74
Scn1aA2APX8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn1aA2APX8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn1aA2APX8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Scn1aA2APX8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn1aA2APX8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.67■□□□□ 0.74
Scn1aA2APX8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scn1aA2APX8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn1aA2APX8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn1aA2APX8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scn1aA2APX8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn1aA2APX8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.67■□□□□ 0.74
Scn1aA2APX8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn1aA2APX8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn1aA2APX8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn1aA2APX8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn1aA2APX8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn1aA2APX8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn1aA2APX8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn1aA2APX8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn1aA2APX8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn1aA2APX8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn1aA2APX8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn1aA2APX8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn1aA2APX8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn1aA2APX8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn1aA2APX8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn1aA2APX8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn1aA2APX8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Scn1aA2APX8 Dio3-201ENSMUST00000097228 1449 ntBASIC19.65■□□□□ 0.74
Scn1aA2APX8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn1aA2APX8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn1aA2APX8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn1aA2APX8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn1aA2APX8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn1aA2APX8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Scn1aA2APX8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.64■□□□□ 0.74
Scn1aA2APX8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Scn1aA2APX8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.64■□□□□ 0.74
Scn1aA2APX8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Scn1aA2APX8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Scn1aA2APX8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn1aA2APX8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn1aA2APX8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn1aA2APX8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn1aA2APX8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scn1aA2APX8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scn1aA2APX8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Scn1aA2APX8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Scn1aA2APX8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.64■□□□□ 0.73
Scn1aA2APX8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Scn1aA2APX8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn1aA2APX8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn1aA2APX8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn1aA2APX8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn1aA2APX8 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms