Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav12-1A0N8R1 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.59■□□□□ 0.09
Trav12-1A0N8R1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12-1A0N8R1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12-1A0N8R1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Trav12-1A0N8R1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Trav12-1A0N8R1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12-1A0N8R1 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.59■□□□□ 0.09
Trav12-1A0N8R1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Trav12-1A0N8R1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12-1A0N8R1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12-1A0N8R1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav12-1A0N8R1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav12-1A0N8R1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav12-1A0N8R1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Trav12-1A0N8R1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav12-1A0N8R1 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.58■□□□□ 0.08
Trav12-1A0N8R1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12-1A0N8R1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12-1A0N8R1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12-1A0N8R1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Trav12-1A0N8R1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12-1A0N8R1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.58■□□□□ 0.08
Trav12-1A0N8R1 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.58■□□□□ 0.08
Trav12-1A0N8R1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12-1A0N8R1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12-1A0N8R1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12-1A0N8R1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12-1A0N8R1 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.58■□□□□ 0.08
Trav12-1A0N8R1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12-1A0N8R1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12-1A0N8R1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12-1A0N8R1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12-1A0N8R1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12-1A0N8R1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Trav12-1A0N8R1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12-1A0N8R1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12-1A0N8R1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12-1A0N8R1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trav12-1A0N8R1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12-1A0N8R1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav12-1A0N8R1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12-1A0N8R1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12-1A0N8R1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav12-1A0N8R1 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.57■□□□□ 0.08
Trav12-1A0N8R1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.57■□□□□ 0.08
Trav12-1A0N8R1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12-1A0N8R1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12-1A0N8R1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12-1A0N8R1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12-1A0N8R1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12-1A0N8R1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trav12-1A0N8R1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.57■□□□□ 0.08
Trav12-1A0N8R1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12-1A0N8R1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12-1A0N8R1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12-1A0N8R1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12-1A0N8R1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12-1A0N8R1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.56■□□□□ 0.08
Trav12-1A0N8R1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12-1A0N8R1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12-1A0N8R1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12-1A0N8R1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12-1A0N8R1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12-1A0N8R1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.56■□□□□ 0.08
Trav12-1A0N8R1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12-1A0N8R1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.56■□□□□ 0.08
Trav12-1A0N8R1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12-1A0N8R1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12-1A0N8R1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12-1A0N8R1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12-1A0N8R1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12-1A0N8R1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav12-1A0N8R1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav12-1A0N8R1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav12-1A0N8R1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.55■□□□□ 0.08
Trav12-1A0N8R1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12-1A0N8R1 Mir7075-201ENSMUST00000184187 82 ntBASIC15.55■□□□□ 0.08
Trav12-1A0N8R1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trav12-1A0N8R1 Gm13241-201ENSMUST00000094493 780 ntBASIC15.55■□□□□ 0.08
Trav12-1A0N8R1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12-1A0N8R1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12-1A0N8R1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12-1A0N8R1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12-1A0N8R1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav12-1A0N8R1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12-1A0N8R1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12-1A0N8R1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12-1A0N8R1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12-1A0N8R1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav12-1A0N8R1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Trav12-1A0N8R1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12-1A0N8R1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12-1A0N8R1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
Trav12-1A0N8R1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12-1A0N8R1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Trav12-1A0N8R1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12-1A0N8R1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12-1A0N8R1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12-1A0N8R1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms