Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 Gm22238-201ENSMUST00000175222 88 ntBASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 Gm6085-201ENSMUST00000182774 1470 ntBASIC12.34□□□□□ -0.43
Igkv1-88A0A140T8N1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Igkv1-88A0A140T8N1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv1-88A0A140T8N1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv1-88A0A140T8N1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv1-88A0A140T8N1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv1-88A0A140T8N1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv1-88A0A140T8N1 Rncr4-201ENSMUST00000194541 2234 ntBASIC12.33□□□□□ -0.44
Igkv1-88A0A140T8N1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv1-88A0A140T8N1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv1-88A0A140T8N1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv1-88A0A140T8N1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC12.33□□□□□ -0.44
Igkv1-88A0A140T8N1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv1-88A0A140T8N1 Gm9959-201ENSMUST00000068277 390 ntBASIC12.33□□□□□ -0.44
Igkv1-88A0A140T8N1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv1-88A0A140T8N1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Igkv1-88A0A140T8N1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv1-88A0A140T8N1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv1-88A0A140T8N1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
Igkv1-88A0A140T8N1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv1-88A0A140T8N1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv1-88A0A140T8N1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv1-88A0A140T8N1 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv1-88A0A140T8N1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Igkv1-88A0A140T8N1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv1-88A0A140T8N1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv1-88A0A140T8N1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv1-88A0A140T8N1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv1-88A0A140T8N1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv1-88A0A140T8N1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Igkv1-88A0A140T8N1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC12.32□□□□□ -0.44
Igkv1-88A0A140T8N1 AC154266.1-201ENSMUST00000223190 503 ntBASIC12.32□□□□□ -0.44
Igkv1-88A0A140T8N1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv1-88A0A140T8N1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv1-88A0A140T8N1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv1-88A0A140T8N1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Igkv1-88A0A140T8N1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv1-88A0A140T8N1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv1-88A0A140T8N1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv1-88A0A140T8N1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv1-88A0A140T8N1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Igkv1-88A0A140T8N1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC12.32□□□□□ -0.44
Igkv1-88A0A140T8N1 Gm6627-201ENSMUST00000218299 2386 ntBASIC12.32□□□□□ -0.44
Igkv1-88A0A140T8N1 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv1-88A0A140T8N1 Gm18688-201ENSMUST00000204695 1859 ntBASIC12.31□□□□□ -0.44
Igkv1-88A0A140T8N1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv1-88A0A140T8N1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Igkv1-88A0A140T8N1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv1-88A0A140T8N1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Igkv1-88A0A140T8N1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Igkv1-88A0A140T8N1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv1-88A0A140T8N1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv1-88A0A140T8N1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv1-88A0A140T8N1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Igkv1-88A0A140T8N1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Igkv1-88A0A140T8N1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv1-88A0A140T8N1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC12.31□□□□□ -0.44
Igkv1-88A0A140T8N1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv1-88A0A140T8N1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv1-88A0A140T8N1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC12.31□□□□□ -0.44
Igkv1-88A0A140T8N1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv1-88A0A140T8N1 AC093043.1-201ENSMUST00000226700 898 ntBASIC12.31□□□□□ -0.44
Igkv1-88A0A140T8N1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Igkv1-88A0A140T8N1 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv1-88A0A140T8N1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv1-88A0A140T8N1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv1-88A0A140T8N1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv1-88A0A140T8N1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv1-88A0A140T8N1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv1-88A0A140T8N1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Igkv1-88A0A140T8N1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv1-88A0A140T8N1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC12.3□□□□□ -0.44
Igkv1-88A0A140T8N1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv1-88A0A140T8N1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv1-88A0A140T8N1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv1-88A0A140T8N1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv1-88A0A140T8N1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Igkv1-88A0A140T8N1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv1-88A0A140T8N1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv1-88A0A140T8N1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv1-88A0A140T8N1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms