Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.88□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-1A0A0B4J1P8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.87□□□□□ -0.19
Trbv13-1A0A0B4J1P8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.87□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Reep4-203ENSMUST00000226563 1444 ntBASIC13.87□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.87□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-1A0A0B4J1P8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC13.86□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Gm13234-201ENSMUST00000120010 747 ntBASIC13.86□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Gm37179-201ENSMUST00000194862 823 ntBASIC13.86□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-1A0A0B4J1P8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-1A0A0B4J1P8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-1A0A0B4J1P8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.85□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC13.85□□□□□ -0.19
Trbv13-1A0A0B4J1P8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.85□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
Trbv13-1A0A0B4J1P8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-1A0A0B4J1P8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.84□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-1A0A0B4J1P8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.84□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.84□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.84□□□□□ -0.19
Trbv13-1A0A0B4J1P8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
Trbv13-1A0A0B4J1P8 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms