Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Gm7290-201ENSMUST00000104990 617 ntBASIC16.55■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Gm12918-201ENSMUST00000120234 636 ntBASIC16.55■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Gm15710-201ENSMUST00000121821 636 ntBASIC16.55■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Gm5075-201ENSMUST00000196916 622 ntBASIC16.55■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.55■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.55■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.55■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Golph3-205ENSMUST00000228671 2842 ntBASIC16.55■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv12-1A0A0B4J1H0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.54■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.54■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.54■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv12-1A0A0B4J1H0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.54■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.53■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv12-1A0A0B4J1H0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.53■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv12-1A0A0B4J1H0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.53■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.52■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.52■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.52■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.52■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.52■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trbv12-1A0A0B4J1H0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Gm37179-201ENSMUST00000194862 823 ntBASIC16.51■□□□□ 0.23
Trbv12-1A0A0B4J1H0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.51■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv12-1A0A0B4J1H0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.5■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.5■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.5■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.5■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Gm6365-201ENSMUST00000054711 744 ntBASIC16.5■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.5■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms