Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv1A0A0B4J1G7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv1A0A0B4J1G7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv1A0A0B4J1G7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv1A0A0B4J1G7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trbv1A0A0B4J1G7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv1A0A0B4J1G7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.64□□□□□ -0.07
Trbv1A0A0B4J1G7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv1A0A0B4J1G7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv1A0A0B4J1G7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv1A0A0B4J1G7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv1A0A0B4J1G7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv1A0A0B4J1G7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv1A0A0B4J1G7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv1A0A0B4J1G7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv1A0A0B4J1G7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv1A0A0B4J1G7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv1A0A0B4J1G7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv1A0A0B4J1G7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv1A0A0B4J1G7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv1A0A0B4J1G7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv1A0A0B4J1G7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv1A0A0B4J1G7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv1A0A0B4J1G7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv1A0A0B4J1G7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv1A0A0B4J1G7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv1A0A0B4J1G7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv1A0A0B4J1G7 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.63□□□□□ -0.07
Trbv1A0A0B4J1G7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv1A0A0B4J1G7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.63□□□□□ -0.07
Trbv1A0A0B4J1G7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trbv1A0A0B4J1G7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv1A0A0B4J1G7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv1A0A0B4J1G7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv1A0A0B4J1G7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trbv1A0A0B4J1G7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.62□□□□□ -0.07
Trbv1A0A0B4J1G7 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.62□□□□□ -0.07
Trbv1A0A0B4J1G7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.62□□□□□ -0.07
Trbv1A0A0B4J1G7 Gm13241-201ENSMUST00000094493 780 ntBASIC14.62□□□□□ -0.07
Trbv1A0A0B4J1G7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv1A0A0B4J1G7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv1A0A0B4J1G7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv1A0A0B4J1G7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv1A0A0B4J1G7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv1A0A0B4J1G7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trbv1A0A0B4J1G7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.61□□□□□ -0.07
Trbv1A0A0B4J1G7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv1A0A0B4J1G7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Trbv1A0A0B4J1G7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv1A0A0B4J1G7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv1A0A0B4J1G7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trbv1A0A0B4J1G7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv1A0A0B4J1G7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv1A0A0B4J1G7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv1A0A0B4J1G7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv1A0A0B4J1G7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv1A0A0B4J1G7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv1A0A0B4J1G7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trbv1A0A0B4J1G7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv1A0A0B4J1G7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv1A0A0B4J1G7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trbv1A0A0B4J1G7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv1A0A0B4J1G7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv1A0A0B4J1G7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv1A0A0B4J1G7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv1A0A0B4J1G7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trbv1A0A0B4J1G7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv1A0A0B4J1G7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.6□□□□□ -0.07
Trbv1A0A0B4J1G7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv1A0A0B4J1G7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv1A0A0B4J1G7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv1A0A0B4J1G7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv1A0A0B4J1G7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trbv1A0A0B4J1G7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv1A0A0B4J1G7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv1A0A0B4J1G7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv1A0A0B4J1G7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv1A0A0B4J1G7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv1A0A0B4J1G7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv1A0A0B4J1G7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trbv1A0A0B4J1G7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv1A0A0B4J1G7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Trbv1A0A0B4J1G7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv1A0A0B4J1G7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv1A0A0B4J1G7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv1A0A0B4J1G7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv1A0A0B4J1G7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv1A0A0B4J1G7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trbv1A0A0B4J1G7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv1A0A0B4J1G7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.59□□□□□ -0.07
Trbv1A0A0B4J1G7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trbv1A0A0B4J1G7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv1A0A0B4J1G7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv1A0A0B4J1G7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv1A0A0B4J1G7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv1A0A0B4J1G7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv1A0A0B4J1G7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trbv1A0A0B4J1G7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trbv1A0A0B4J1G7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trbv1A0A0B4J1G7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 7 ms