Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.16■□□□□ 0.02
Gm28778A0A087WSK7 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.16■□□□□ 0.02
Gm28778A0A087WSK7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28778A0A087WSK7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28778A0A087WSK7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28778A0A087WSK7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28778A0A087WSK7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Gm28778A0A087WSK7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Gm28778A0A087WSK7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28778A0A087WSK7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.15■□□□□ 0.02
Gm28778A0A087WSK7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28778A0A087WSK7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28778A0A087WSK7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28778A0A087WSK7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28778A0A087WSK7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28778A0A087WSK7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Gm28778A0A087WSK7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28778A0A087WSK7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Gm28778A0A087WSK7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.15■□□□□ 0.02
Gm28778A0A087WSK7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Gm28778A0A087WSK7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28778A0A087WSK7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28778A0A087WSK7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28778A0A087WSK7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28778A0A087WSK7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28778A0A087WSK7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28778A0A087WSK7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28778A0A087WSK7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.14■□□□□ 0.01
Gm28778A0A087WSK7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.14■□□□□ 0.01
Gm28778A0A087WSK7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.14■□□□□ 0.01
Gm28778A0A087WSK7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28778A0A087WSK7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28778A0A087WSK7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28778A0A087WSK7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28778A0A087WSK7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.14■□□□□ 0.01
Gm28778A0A087WSK7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28778A0A087WSK7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.14■□□□□ 0.01
Gm28778A0A087WSK7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Gm28778A0A087WSK7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28778A0A087WSK7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28778A0A087WSK7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28778A0A087WSK7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28778A0A087WSK7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28778A0A087WSK7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28778A0A087WSK7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28778A0A087WSK7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Gm28778A0A087WSK7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.13■□□□□ 0.01
Gm28778A0A087WSK7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.13■□□□□ 0.01
Gm28778A0A087WSK7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28778A0A087WSK7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28778A0A087WSK7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28778A0A087WSK7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28778A0A087WSK7 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.13■□□□□ 0.01
Gm28778A0A087WSK7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28778A0A087WSK7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28778A0A087WSK7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28778A0A087WSK7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28778A0A087WSK7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28778A0A087WSK7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Gm28778A0A087WSK7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28778A0A087WSK7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28778A0A087WSK7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28778A0A087WSK7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.12■□□□□ 0.01
Gm28778A0A087WSK7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.12■□□□□ 0.01
Gm28778A0A087WSK7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.12■□□□□ 0.01
Gm28778A0A087WSK7 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.12■□□□□ 0.01
Gm28778A0A087WSK7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm28778A0A087WSK7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28778A0A087WSK7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28778A0A087WSK7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28778A0A087WSK7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28778A0A087WSK7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28778A0A087WSK7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Gm28778A0A087WSK7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm28778A0A087WSK7 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.12■□□□□ 0.01
Gm28778A0A087WSK7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28778A0A087WSK7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28778A0A087WSK7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Gm28778A0A087WSK7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28778A0A087WSK7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.11■□□□□ 0.01
Gm28778A0A087WSK7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.11■□□□□ 0.01
Gm28778A0A087WSK7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28778A0A087WSK7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28778A0A087WSK7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28778A0A087WSK7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28778A0A087WSK7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28778A0A087WSK7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28778A0A087WSK7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28778A0A087WSK7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28778A0A087WSK7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28778A0A087WSK7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28778A0A087WSK7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28778A0A087WSK7 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.1■□□□□ 0.01
Gm28778A0A087WSK7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28778A0A087WSK7 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.1■□□□□ 0.01
Gm28778A0A087WSK7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.1■□□□□ 0.01
Gm28778A0A087WSK7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
Gm28778A0A087WSK7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.1■□□□□ 0.01
Gm28778A0A087WSK7 Gm37179-201ENSMUST00000194862 823 ntBASIC15.1■□□□□ 0.01
Gm28778A0A087WSK7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms