Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9d-1A0A075B699 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9d-1A0A075B699 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9d-1A0A075B699 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9d-1A0A075B699 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9d-1A0A075B699 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.4□□□□□ -0.1
Trav9d-1A0A075B699 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9d-1A0A075B699 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9d-1A0A075B699 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9d-1A0A075B699 Rarb-207ENSMUST00000225921 2756 ntBASIC14.4□□□□□ -0.1
Trav9d-1A0A075B699 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav9d-1A0A075B699 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav9d-1A0A075B699 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9d-1A0A075B699 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9d-1A0A075B699 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav9d-1A0A075B699 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav9d-1A0A075B699 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9d-1A0A075B699 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav9d-1A0A075B699 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9d-1A0A075B699 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.11
Trav9d-1A0A075B699 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9d-1A0A075B699 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9d-1A0A075B699 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9d-1A0A075B699 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9d-1A0A075B699 Gm11421-201ENSMUST00000122124 294 ntBASIC14.39□□□□□ -0.11
Trav9d-1A0A075B699 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9d-1A0A075B699 Smad6-203ENSMUST00000179458 273 ntBASIC14.39□□□□□ -0.11
Trav9d-1A0A075B699 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav9d-1A0A075B699 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav9d-1A0A075B699 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav9d-1A0A075B699 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trav9d-1A0A075B699 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9d-1A0A075B699 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9d-1A0A075B699 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9d-1A0A075B699 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trav9d-1A0A075B699 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9d-1A0A075B699 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.38□□□□□ -0.11
Trav9d-1A0A075B699 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav9d-1A0A075B699 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Trav9d-1A0A075B699 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav9d-1A0A075B699 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9d-1A0A075B699 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9d-1A0A075B699 Gm8493-201ENSMUST00000196881 489 ntBASIC14.38□□□□□ -0.11
Trav9d-1A0A075B699 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9d-1A0A075B699 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9d-1A0A075B699 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9d-1A0A075B699 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9d-1A0A075B699 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9d-1A0A075B699 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav9d-1A0A075B699 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9d-1A0A075B699 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9d-1A0A075B699 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9d-1A0A075B699 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav9d-1A0A075B699 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9d-1A0A075B699 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9d-1A0A075B699 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9d-1A0A075B699 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9d-1A0A075B699 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9d-1A0A075B699 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav9d-1A0A075B699 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trav9d-1A0A075B699 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9d-1A0A075B699 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav9d-1A0A075B699 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9d-1A0A075B699 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9d-1A0A075B699 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Trav9d-1A0A075B699 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9d-1A0A075B699 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.37□□□□□ -0.11
Trav9d-1A0A075B699 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9d-1A0A075B699 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav9d-1A0A075B699 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9d-1A0A075B699 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav9d-1A0A075B699 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9d-1A0A075B699 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.37□□□□□ -0.11
Trav9d-1A0A075B699 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9d-1A0A075B699 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav9d-1A0A075B699 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9d-1A0A075B699 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9d-1A0A075B699 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.36□□□□□ -0.11
Trav9d-1A0A075B699 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9d-1A0A075B699 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9d-1A0A075B699 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Trav9d-1A0A075B699 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9d-1A0A075B699 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.36□□□□□ -0.11
Trav9d-1A0A075B699 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav9d-1A0A075B699 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9d-1A0A075B699 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9d-1A0A075B699 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.36□□□□□ -0.11
Trav9d-1A0A075B699 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9d-1A0A075B699 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9d-1A0A075B699 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav9d-1A0A075B699 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav9d-1A0A075B699 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9d-1A0A075B699 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9d-1A0A075B699 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9d-1A0A075B699 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9d-1A0A075B699 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9d-1A0A075B699 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9d-1A0A075B699 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9d-1A0A075B699 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9d-1A0A075B699 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms