Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-4-dv10A0A075B651 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav4-4-dv10A0A075B651 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-4-dv10A0A075B651 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-4-dv10A0A075B651 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav4-4-dv10A0A075B651 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
Trav4-4-dv10A0A075B651 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-4-dv10A0A075B651 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav4-4-dv10A0A075B651 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav4-4-dv10A0A075B651 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-4-dv10A0A075B651 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-4-dv10A0A075B651 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav4-4-dv10A0A075B651 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trav4-4-dv10A0A075B651 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-4-dv10A0A075B651 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-4-dv10A0A075B651 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav4-4-dv10A0A075B651 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.55□□□□□ -0.08
Trav4-4-dv10A0A075B651 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.55□□□□□ -0.08
Trav4-4-dv10A0A075B651 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-4-dv10A0A075B651 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-4-dv10A0A075B651 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.55□□□□□ -0.08
Trav4-4-dv10A0A075B651 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-4-dv10A0A075B651 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-4-dv10A0A075B651 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-4-dv10A0A075B651 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-4-dv10A0A075B651 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-4-dv10A0A075B651 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav4-4-dv10A0A075B651 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Trav4-4-dv10A0A075B651 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-4-dv10A0A075B651 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-4-dv10A0A075B651 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-4-dv10A0A075B651 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-4-dv10A0A075B651 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav4-4-dv10A0A075B651 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav4-4-dv10A0A075B651 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-4-dv10A0A075B651 Rps24-207ENSMUST00000224568 714 ntBASIC14.54□□□□□ -0.08
Trav4-4-dv10A0A075B651 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-4-dv10A0A075B651 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-4-dv10A0A075B651 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-4-dv10A0A075B651 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav4-4-dv10A0A075B651 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-4-dv10A0A075B651 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-4-dv10A0A075B651 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-4-dv10A0A075B651 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-4-dv10A0A075B651 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.54□□□□□ -0.08
Trav4-4-dv10A0A075B651 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-4-dv10A0A075B651 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav4-4-dv10A0A075B651 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-4-dv10A0A075B651 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-4-dv10A0A075B651 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-4-dv10A0A075B651 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav4-4-dv10A0A075B651 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-4-dv10A0A075B651 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-4-dv10A0A075B651 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-4-dv10A0A075B651 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-4-dv10A0A075B651 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-4-dv10A0A075B651 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav4-4-dv10A0A075B651 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Trav4-4-dv10A0A075B651 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-4-dv10A0A075B651 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-4-dv10A0A075B651 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-4-dv10A0A075B651 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-4-dv10A0A075B651 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trav4-4-dv10A0A075B651 Gm7860-201ENSMUST00000121190 879 ntBASIC14.53□□□□□ -0.08
Trav4-4-dv10A0A075B651 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-4-dv10A0A075B651 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-4-dv10A0A075B651 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-4-dv10A0A075B651 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-4-dv10A0A075B651 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-4-dv10A0A075B651 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-4-dv10A0A075B651 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-4-dv10A0A075B651 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav4-4-dv10A0A075B651 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav4-4-dv10A0A075B651 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav4-4-dv10A0A075B651 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Trav4-4-dv10A0A075B651 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.52□□□□□ -0.08
Trav4-4-dv10A0A075B651 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav4-4-dv10A0A075B651 Gm14117-201ENSMUST00000122417 843 ntBASIC14.52□□□□□ -0.09
Trav4-4-dv10A0A075B651 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.52□□□□□ -0.09
Trav4-4-dv10A0A075B651 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav4-4-dv10A0A075B651 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.52□□□□□ -0.09
Trav4-4-dv10A0A075B651 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav4-4-dv10A0A075B651 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav4-4-dv10A0A075B651 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav4-4-dv10A0A075B651 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Trav4-4-dv10A0A075B651 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav4-4-dv10A0A075B651 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trav4-4-dv10A0A075B651 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav4-4-dv10A0A075B651 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4-4-dv10A0A075B651 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4-4-dv10A0A075B651 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4-4-dv10A0A075B651 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4-4-dv10A0A075B651 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4-4-dv10A0A075B651 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav4-4-dv10A0A075B651 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4-4-dv10A0A075B651 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4-4-dv10A0A075B651 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4-4-dv10A0A075B651 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.51□□□□□ -0.09
Trav4-4-dv10A0A075B651 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav4-4-dv10A0A075B651 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms