Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4d-3A0A075B625 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4d-3A0A075B625 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4d-3A0A075B625 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4d-3A0A075B625 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4d-3A0A075B625 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4d-3A0A075B625 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav4d-3A0A075B625 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4d-3A0A075B625 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.73□□□□□ -0.37
Trav4d-3A0A075B625 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4d-3A0A075B625 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav4d-3A0A075B625 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4d-3A0A075B625 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav4d-3A0A075B625 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav4d-3A0A075B625 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4d-3A0A075B625 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav4d-3A0A075B625 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4d-3A0A075B625 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4d-3A0A075B625 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4d-3A0A075B625 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4d-3A0A075B625 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC12.72□□□□□ -0.37
Trav4d-3A0A075B625 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4d-3A0A075B625 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4d-3A0A075B625 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4d-3A0A075B625 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4d-3A0A075B625 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4d-3A0A075B625 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4d-3A0A075B625 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4d-3A0A075B625 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4d-3A0A075B625 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC12.72□□□□□ -0.37
Trav4d-3A0A075B625 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4d-3A0A075B625 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4d-3A0A075B625 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4d-3A0A075B625 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav4d-3A0A075B625 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav4d-3A0A075B625 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4d-3A0A075B625 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4d-3A0A075B625 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4d-3A0A075B625 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4d-3A0A075B625 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav4d-3A0A075B625 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.72□□□□□ -0.37
Trav4d-3A0A075B625 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav4d-3A0A075B625 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4d-3A0A075B625 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav4d-3A0A075B625 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav4d-3A0A075B625 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4d-3A0A075B625 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4d-3A0A075B625 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4d-3A0A075B625 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4d-3A0A075B625 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav4d-3A0A075B625 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav4d-3A0A075B625 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4d-3A0A075B625 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4d-3A0A075B625 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4d-3A0A075B625 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4d-3A0A075B625 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4d-3A0A075B625 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4d-3A0A075B625 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4d-3A0A075B625 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4d-3A0A075B625 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4d-3A0A075B625 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4d-3A0A075B625 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav4d-3A0A075B625 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4d-3A0A075B625 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4d-3A0A075B625 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav4d-3A0A075B625 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4d-3A0A075B625 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4d-3A0A075B625 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4d-3A0A075B625 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav4d-3A0A075B625 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav4d-3A0A075B625 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4d-3A0A075B625 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav4d-3A0A075B625 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4d-3A0A075B625 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4d-3A0A075B625 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav4d-3A0A075B625 Gm8969-201ENSMUST00000199694 526 ntBASIC12.69□□□□□ -0.38
Trav4d-3A0A075B625 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4d-3A0A075B625 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4d-3A0A075B625 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav4d-3A0A075B625 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4d-3A0A075B625 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4d-3A0A075B625 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4d-3A0A075B625 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4d-3A0A075B625 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4d-3A0A075B625 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
Trav4d-3A0A075B625 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4d-3A0A075B625 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4d-3A0A075B625 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms