Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-1A0A075B606 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-1A0A075B606 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-1A0A075B606 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-1A0A075B606 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav13d-1A0A075B606 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-1A0A075B606 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav13d-1A0A075B606 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.66□□□□□ -0.22
Trav13d-1A0A075B606 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav13d-1A0A075B606 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-1A0A075B606 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav13d-1A0A075B606 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-1A0A075B606 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-1A0A075B606 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-1A0A075B606 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav13d-1A0A075B606 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Trav13d-1A0A075B606 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-1A0A075B606 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav13d-1A0A075B606 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-1A0A075B606 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav13d-1A0A075B606 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-1A0A075B606 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav13d-1A0A075B606 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-1A0A075B606 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.65□□□□□ -0.22
Trav13d-1A0A075B606 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.65□□□□□ -0.22
Trav13d-1A0A075B606 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-1A0A075B606 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.65□□□□□ -0.22
Trav13d-1A0A075B606 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-1A0A075B606 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.65□□□□□ -0.22
Trav13d-1A0A075B606 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-1A0A075B606 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-1A0A075B606 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-1A0A075B606 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav13d-1A0A075B606 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trav13d-1A0A075B606 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav13d-1A0A075B606 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-1A0A075B606 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav13d-1A0A075B606 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-1A0A075B606 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-1A0A075B606 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-1A0A075B606 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-1A0A075B606 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav13d-1A0A075B606 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav13d-1A0A075B606 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-1A0A075B606 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-1A0A075B606 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-1A0A075B606 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav13d-1A0A075B606 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-1A0A075B606 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-1A0A075B606 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-1A0A075B606 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-1A0A075B606 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-1A0A075B606 Gm13146-201ENSMUST00000118508 780 ntBASIC13.63□□□□□ -0.23
Trav13d-1A0A075B606 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-1A0A075B606 Mir5133-201ENSMUST00000174955 77 ntBASIC13.63□□□□□ -0.23
Trav13d-1A0A075B606 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-1A0A075B606 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-1A0A075B606 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav13d-1A0A075B606 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-1A0A075B606 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.63□□□□□ -0.23
Trav13d-1A0A075B606 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav13d-1A0A075B606 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-1A0A075B606 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-1A0A075B606 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav13d-1A0A075B606 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-1A0A075B606 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-1A0A075B606 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav13d-1A0A075B606 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav13d-1A0A075B606 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-1A0A075B606 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-1A0A075B606 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav13d-1A0A075B606 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-1A0A075B606 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-1A0A075B606 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav13d-1A0A075B606 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-1A0A075B606 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-1A0A075B606 Gm7860-201ENSMUST00000121190 879 ntBASIC13.62□□□□□ -0.23
Trav13d-1A0A075B606 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.62□□□□□ -0.23
Trav13d-1A0A075B606 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.62□□□□□ -0.23
Trav13d-1A0A075B606 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.62□□□□□ -0.23
Trav13d-1A0A075B606 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-1A0A075B606 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-1A0A075B606 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav13d-1A0A075B606 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Trav13d-1A0A075B606 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-1A0A075B606 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-1A0A075B606 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-1A0A075B606 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav13d-1A0A075B606 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-1A0A075B606 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav13d-1A0A075B606 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav13d-1A0A075B606 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-1A0A075B606 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-1A0A075B606 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav13d-1A0A075B606 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-1A0A075B606 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-1A0A075B606 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav13d-1A0A075B606 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trav13d-1A0A075B606 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav13d-1A0A075B606 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms