Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm4887-201ENSMUST00000122230 1053 ntBASIC10.02□□□□□ -0.81
RtcbQ99LF4 Gm26184-201ENSMUST00000157686 131 ntBASIC10.02□□□□□ -0.81
RtcbQ99LF4 Gm22730-201ENSMUST00000158085 171 ntBASIC10.02□□□□□ -0.81
RtcbQ99LF4 Hmgcr-209ENSMUST00000170287 2981 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
RtcbQ99LF4 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
RtcbQ99LF4 Gm27001-201ENSMUST00000182252 936 ntBASIC10.02□□□□□ -0.81
RtcbQ99LF4 Cd22-203ENSMUST00000186154 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RtcbQ99LF4 Gm29355-201ENSMUST00000188178 697 ntBASIC10.02□□□□□ -0.81
RtcbQ99LF4 Gm28953-201ENSMUST00000188336 697 ntBASIC10.02□□□□□ -0.81
RtcbQ99LF4 Gm20788-201ENSMUST00000190538 697 ntBASIC10.02□□□□□ -0.81
RtcbQ99LF4 Gm37395-201ENSMUST00000194721 697 ntBASIC10.02□□□□□ -0.81
RtcbQ99LF4 Gm43711-201ENSMUST00000195994 373 ntBASIC10.02□□□□□ -0.81
RtcbQ99LF4 Gm30646-201ENSMUST00000207662 180 ntBASIC10.02□□□□□ -0.81
RtcbQ99LF4 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC10.02□□□□□ -0.81
RtcbQ99LF4 AL837512.1-201ENSMUST00000223914 1073 ntBASIC10.02□□□□□ -0.81
RtcbQ99LF4 9230104L09Rik-201ENSMUST00000028937 661 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RtcbQ99LF4 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
RtcbQ99LF4 Mir135b-201ENSMUST00000083501 97 ntBASIC10.02□□□□□ -0.81
RtcbQ99LF4 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
RtcbQ99LF4 Pitpnm2os1-201ENSMUST00000161697 1618 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
RtcbQ99LF4 Sptbn1-201ENSMUST00000006629 8461 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
RtcbQ99LF4 Gm45629-201ENSMUST00000209629 2546 ntBASIC10.02□□□□□ -0.81
RtcbQ99LF4 Arhgap4-205ENSMUST00000114407 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
RtcbQ99LF4 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
RtcbQ99LF4 Sntg1-207ENSMUST00000140295 4887 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RtcbQ99LF4 Drp2-204ENSMUST00000113228 3141 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
RtcbQ99LF4 Pde8b-210ENSMUST00000162412 4035 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
RtcbQ99LF4 Gata4-203ENSMUST00000121312 2407 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
RtcbQ99LF4 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
RtcbQ99LF4 Gm44752-201ENSMUST00000207140 3305 ntBASIC10.02□□□□□ -0.81
RtcbQ99LF4 Pcyt1a-201ENSMUST00000079791 4789 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RtcbQ99LF4 Aldh2-201ENSMUST00000031411 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RtcbQ99LF4 Gm38014-201ENSMUST00000193349 2612 ntBASIC10.02□□□□□ -0.81
RtcbQ99LF4 Tlr5-201ENSMUST00000110997 3199 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
RtcbQ99LF4 Pln-202ENSMUST00000163319 1715 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
RtcbQ99LF4 Fer-201ENSMUST00000000129 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Gm43910-201ENSMUST00000204561 3241 ntBASIC10.01□□□□□ -0.81
RtcbQ99LF4 Pla2g2c-202ENSMUST00000105808 3448 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Nipal4-201ENSMUST00000020679 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Osmr-204ENSMUST00000176826 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Cyld-205ENSMUST00000209532 7990 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Gpr63-201ENSMUST00000038920 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Col19a1-201ENSMUST00000051344 3336 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Gm37065-203ENSMUST00000192498 1622 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Brinp3-205ENSMUST00000166814 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Clasp1-221ENSMUST00000191823 3916 ntTSL 5 BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Tnfrsf10b-201ENSMUST00000022663 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Slc12a8-201ENSMUST00000059056 3166 ntAPPRIS P2 TSL 2 BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Lyn-202ENSMUST00000103010 3387 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Mir669e-201ENSMUST00000117003 119 ntBASIC10.01□□□□□ -0.81
RtcbQ99LF4 Gm5530-201ENSMUST00000117185 985 ntBASIC10.01□□□□□ -0.81
RtcbQ99LF4 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Gm24782-201ENSMUST00000157641 132 ntBASIC10.01□□□□□ -0.81
RtcbQ99LF4 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Gm21839-201ENSMUST00000179536 378 ntBASIC10.01□□□□□ -0.81
RtcbQ99LF4 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Gm18985-201ENSMUST00000196472 1079 ntBASIC10.01□□□□□ -0.81
RtcbQ99LF4 Gm19764-201ENSMUST00000203630 649 ntBASIC10.01□□□□□ -0.81
RtcbQ99LF4 Gm44061-201ENSMUST00000203962 1195 ntBASIC10.01□□□□□ -0.81
RtcbQ99LF4 Gm19254-201ENSMUST00000204828 294 ntBASIC10.01□□□□□ -0.81
RtcbQ99LF4 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Olfr503-202ENSMUST00000211693 966 ntAPPRIS ALT1 BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Gm8512-201ENSMUST00000215367 471 ntBASIC10.01□□□□□ -0.81
RtcbQ99LF4 AC160338.2-201ENSMUST00000215508 281 ntTSL 5 BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Gm18329-201ENSMUST00000215832 589 ntBASIC10.01□□□□□ -0.81
RtcbQ99LF4 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
RtcbQ99LF4 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC10.01□□□□□ -0.81
RtcbQ99LF4 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC10.01□□□□□ -0.81
RtcbQ99LF4 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Olfr503-201ENSMUST00000078162 972 ntAPPRIS P2 BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Gm11855-201ENSMUST00000121562 1869 ntBASIC10.01□□□□□ -0.81
RtcbQ99LF4 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
RtcbQ99LF4 D830032E09Rik-203ENSMUST00000189845 2092 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Slc13a1-201ENSMUST00000031713 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Fmnl1-203ENSMUST00000107027 3693 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Gm26574-201ENSMUST00000181876 2141 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Gm38001-201ENSMUST00000192900 3761 ntBASIC10.01□□□□□ -0.81
RtcbQ99LF4 4930428N03Rik-204ENSMUST00000224456 3212 ntBASIC10.01□□□□□ -0.81
RtcbQ99LF4 Lamb3-201ENSMUST00000016315 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Lig3-211ENSMUST00000173722 5797 ntAPPRIS P3 TSL 5 BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Cenpi-202ENSMUST00000101251 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
RtcbQ99LF4 Ctnna2-201ENSMUST00000075340 2864 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
RtcbQ99LF4 Slco2b1-203ENSMUST00000107088 4369 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
RtcbQ99LF4 Gm28177-201ENSMUST00000185516 3532 ntTSL 5 BASIC10□□□□□ -0.81
RtcbQ99LF4 Pcdhb7-201ENSMUST00000053037 3501 ntAPPRIS P1 BASIC10□□□□□ -0.81
RtcbQ99LF4 Rnmt-201ENSMUST00000009679 5008 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
RtcbQ99LF4 Cyp2c50-202ENSMUST00000080171 1812 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
RtcbQ99LF4 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC10□□□□□ -0.81
RtcbQ99LF4 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
RtcbQ99LF4 Ick-202ENSMUST00000044551 6560 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms