Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC6.36□□□□□ -1.39
Sdc1P18828 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Sdc1P18828 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sdc1P18828 Gm9105-201ENSMUST00000120160 1398 ntBASIC6.36□□□□□ -1.39
Sdc1P18828 4930578I07Rik-201ENSMUST00000193416 1372 ntBASIC6.36□□□□□ -1.39
Sdc1P18828 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sdc1P18828 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Sdc1P18828 Gm6880-201ENSMUST00000114125 627 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Sdc1P18828 Gm11461-201ENSMUST00000119909 387 ntBASIC6.36□□□□□ -1.39
Sdc1P18828 Gm13505-201ENSMUST00000121666 817 ntBASIC6.36□□□□□ -1.39
Sdc1P18828 Gm22987-201ENSMUST00000122757 246 ntBASIC6.36□□□□□ -1.39
Sdc1P18828 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC6.36□□□□□ -1.39
Sdc1P18828 Gm22847-201ENSMUST00000157707 105 ntBASIC6.36□□□□□ -1.39
Sdc1P18828 Airn-204ENSMUST00000160932 842 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sdc1P18828 Gm19840-201ENSMUST00000169624 882 ntBASIC6.36□□□□□ -1.39
Sdc1P18828 Gm6098-201ENSMUST00000180234 330 ntBASIC6.36□□□□□ -1.39
Sdc1P18828 Tnfaip8-213ENSMUST00000180305 369 ntTSL 5 BASIC6.36□□□□□ -1.39
Sdc1P18828 Gm27383-201ENSMUST00000184418 361 ntBASIC6.36□□□□□ -1.39
Sdc1P18828 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sdc1P18828 Gm43752-201ENSMUST00000198475 697 ntBASIC6.36□□□□□ -1.39
Sdc1P18828 Gm42821-201ENSMUST00000199771 489 ntBASIC6.36□□□□□ -1.39
Sdc1P18828 Gm5043-201ENSMUST00000202103 820 ntBASIC6.36□□□□□ -1.39
Sdc1P18828 Gm20186-203ENSMUST00000202542 741 ntTSL 3 BASIC6.36□□□□□ -1.39
Sdc1P18828 Gm44764-202ENSMUST00000204912 671 ntTSL 3 BASIC6.36□□□□□ -1.39
Sdc1P18828 AC164294.1-201ENSMUST00000224682 688 ntBASIC6.36□□□□□ -1.39
Sdc1P18828 AC152394.1-201ENSMUST00000227360 1086 ntBASIC6.36□□□□□ -1.39
Sdc1P18828 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sdc1P18828 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Sdc1P18828 Olfr1511-201ENSMUST00000078171 957 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Sdc1P18828 Gm26264-201ENSMUST00000083278 159 ntBASIC6.36□□□□□ -1.39
Sdc1P18828 Gm43533-201ENSMUST00000202933 2936 ntBASIC6.36□□□□□ -1.39
Sdc1P18828 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Sdc1P18828 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sdc1P18828 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sdc1P18828 Gm43728-201ENSMUST00000198817 2622 ntBASIC6.36□□□□□ -1.39
Sdc1P18828 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC6.36□□□□□ -1.39
Sdc1P18828 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Sdc1P18828 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sdc1P18828 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sdc1P18828 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sdc1P18828 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC6.35□□□□□ -1.39
Sdc1P18828 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC6.35□□□□□ -1.39
Sdc1P18828 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Sdc1P18828 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Sdc1P18828 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sdc1P18828 Fas-201ENSMUST00000025691 1486 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sdc1P18828 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sdc1P18828 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sdc1P18828 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sdc1P18828 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sdc1P18828 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Sdc1P18828 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.35□□□□□ -1.39
Sdc1P18828 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC6.35□□□□□ -1.39
Sdc1P18828 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sdc1P18828 4930503E24Rik-201ENSMUST00000219167 1333 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sdc1P18828 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
Sdc1P18828 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.35□□□□□ -1.39
Sdc1P18828 Gm10862-201ENSMUST00000193956 3350 ntBASIC6.35□□□□□ -1.39
Sdc1P18828 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Sdc1P18828 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC6.35□□□□□ -1.39
Sdc1P18828 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sdc1P18828 Hbq1b-201ENSMUST00000101387 562 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sdc1P18828 Dcpp3-201ENSMUST00000115428 610 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Sdc1P18828 Fhl1-206ENSMUST00000116596 1203 ntTSL 5 BASIC6.35□□□□□ -1.39
Sdc1P18828 Gm11191-201ENSMUST00000117231 610 ntBASIC6.35□□□□□ -1.39
Sdc1P18828 Gm11480-201ENSMUST00000120214 659 ntBASIC6.35□□□□□ -1.39
Sdc1P18828 Bambi-ps1-201ENSMUST00000121525 592 ntBASIC6.35□□□□□ -1.39
Sdc1P18828 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC6.35□□□□□ -1.39
Sdc1P18828 Arhgef38-204ENSMUST00000161932 1033 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sdc1P18828 Gm11942-201ENSMUST00000180255 345 ntBASIC6.35□□□□□ -1.39
Sdc1P18828 Gm7863-201ENSMUST00000184700 805 ntBASIC6.35□□□□□ -1.39
Sdc1P18828 Gm7369-201ENSMUST00000192738 936 ntBASIC6.35□□□□□ -1.39
Sdc1P18828 Gm17979-201ENSMUST00000196646 611 ntBASIC6.35□□□□□ -1.39
Sdc1P18828 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC6.35□□□□□ -1.39
Sdc1P18828 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sdc1P18828 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
Sdc1P18828 Gm45824-201ENSMUST00000212236 1004 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sdc1P18828 AC133947.1-201ENSMUST00000213336 614 ntTSL 3 BASIC6.35□□□□□ -1.39
Sdc1P18828 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC6.35□□□□□ -1.39
Sdc1P18828 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC6.35□□□□□ -1.39
Sdc1P18828 Gm33682-201ENSMUST00000222233 256 ntTSL 3 BASIC6.35□□□□□ -1.39
Sdc1P18828 AC192333.4-201ENSMUST00000224269 981 ntBASIC6.35□□□□□ -1.39
Sdc1P18828 Gm10123-201ENSMUST00000075723 490 ntBASIC6.35□□□□□ -1.39
Sdc1P18828 n-R5s5-201ENSMUST00000083134 119 ntBASIC6.35□□□□□ -1.39
Sdc1P18828 Mrgprx1-201ENSMUST00000094390 1180 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sdc1P18828 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sdc1P18828 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Sdc1P18828 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sdc1P18828 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC6.35□□□□□ -1.39
Sdc1P18828 Vmn2r41-201ENSMUST00000168807 3617 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Sdc1P18828 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sdc1P18828 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sdc1P18828 Hdac9-203ENSMUST00000209667 1635 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sdc1P18828 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Sdc1P18828 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sdc1P18828 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sdc1P18828 4930488N15Rik-201ENSMUST00000212830 1561 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sdc1P18828 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sdc1P18828 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Sdc1P18828 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms