Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm5190-201ENSMUST00000192434 357 ntBASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Gm38839-201ENSMUST00000203833 633 ntTSL 2 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 AC153569.1-201ENSMUST00000215873 807 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Gm33263-201ENSMUST00000220371 459 ntTSL 2 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 AL844586.1-201ENSMUST00000224297 1042 ntBASIC8.12□□□□□ -1.11
Trim39Q9ESN2 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC8.12□□□□□ -1.11
Trim39Q9ESN2 CT573085.2-201ENSMUST00000226097 552 ntBASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Rnf219-204ENSMUST00000228448 1056 ntAPPRIS ALT2 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Calca-202ENSMUST00000032907 830 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Ang4-201ENSMUST00000073860 709 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Gm43290-201ENSMUST00000200359 1557 ntBASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Cacna2d4-205ENSMUST00000186622 3710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Dbt-201ENSMUST00000000349 3301 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Cd99l2-201ENSMUST00000037391 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Optn-202ENSMUST00000114996 2614 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Aqp9-201ENSMUST00000060917 2643 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Aqp9-202ENSMUST00000074465 2646 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Gm38095-201ENSMUST00000192896 1402 ntBASIC8.12□□□□□ -1.11
Trim39Q9ESN2 4930408K08Rik-201ENSMUST00000195936 1436 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Plp1-202ENSMUST00000113085 2540 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Wdr59-203ENSMUST00000211981 3618 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Slc14a1-202ENSMUST00000160292 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Dgkh-206ENSMUST00000228362 3308 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Arhgap17-204ENSMUST00000205262 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Nudt13-201ENSMUST00000022343 2494 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Nbr1-204ENSMUST00000107208 4344 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 2600014E21Rik-201ENSMUST00000186411 4805 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm37818-201ENSMUST00000194952 3169 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Rab6a-203ENSMUST00000107048 2617 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm13302-201ENSMUST00000119405 1849 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Frk-201ENSMUST00000019913 4696 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm37091-201ENSMUST00000195455 2087 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Otx2-210ENSMUST00000227404 2086 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 9330158H04Rik-208ENSMUST00000161820 2324 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Icosl-201ENSMUST00000105393 2814 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Ighv11-1-201ENSMUST00000103466 353 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm16007-201ENSMUST00000117837 286 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm14754-201ENSMUST00000119762 726 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Fuom-202ENSMUST00000120034 680 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm11223-201ENSMUST00000120560 450 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Katnal2-203ENSMUST00000123650 638 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Cfap126-204ENSMUST00000129651 766 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm14344-201ENSMUST00000139338 580 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 1700060C16Rik-201ENSMUST00000150559 645 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gzmg-201ENSMUST00000015578 909 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm3235-201ENSMUST00000168442 695 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm8257-203ENSMUST00000179215 489 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 3300005D01Rik-204ENSMUST00000181484 1174 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm28446-201ENSMUST00000186508 694 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 1700030L20Rik-201ENSMUST00000189233 985 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Ighv5-21-201ENSMUST00000191935 295 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm17806-201ENSMUST00000195844 383 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm43959-201ENSMUST00000203740 577 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 1700016J18Rik-201ENSMUST00000214172 249 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Olfr362-203ENSMUST00000215927 1210 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Ccdc153-206ENSMUST00000216632 800 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm19340-201ENSMUST00000221995 345 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 AC154552.5-201ENSMUST00000222352 207 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm9973-205ENSMUST00000223449 849 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 CT025533.1-201ENSMUST00000227485 706 ntBASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms