Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm9750-201ENSMUST00000142025 2017 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Usp54Q8BL06 AA986860-201ENSMUST00000039323 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Usp54Q8BL06 Acpp-202ENSMUST00000112590 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Usp54Q8BL06 Mrpl32-202ENSMUST00000220621 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Usp54Q8BL06 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Usp54Q8BL06 Cbr4-201ENSMUST00000034058 4309 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Usp54Q8BL06 Synj2-207ENSMUST00000115788 3498 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Usp54Q8BL06 Hmgcs1-202ENSMUST00000224188 3464 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Usp54Q8BL06 Kcnma1-206ENSMUST00000163322 3162 ntTSL 5 BASIC11.18□□□□□ -0.62
Usp54Q8BL06 Kcnma1-210ENSMUST00000179836 3177 ntTSL 5 BASIC11.18□□□□□ -0.62
Usp54Q8BL06 Gm14824-201ENSMUST00000119421 737 ntBASIC11.18□□□□□ -0.62
Usp54Q8BL06 Gm13776-201ENSMUST00000122236 1261 ntBASIC11.18□□□□□ -0.62
Usp54Q8BL06 Gm12158-201ENSMUST00000130493 631 ntTSL 3 BASIC11.18□□□□□ -0.62
Usp54Q8BL06 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Usp54Q8BL06 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Usp54Q8BL06 Cpsf6-208ENSMUST00000177145 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Usp54Q8BL06 Gm23139-201ENSMUST00000179454 132 ntBASIC11.18□□□□□ -0.62
Usp54Q8BL06 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC11.18□□□□□ -0.62
Usp54Q8BL06 Gm44590-201ENSMUST00000206161 391 ntBASIC11.18□□□□□ -0.62
Usp54Q8BL06 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Usp54Q8BL06 1700018P08Rik-201ENSMUST00000212522 1239 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Usp54Q8BL06 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Usp54Q8BL06 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Usp54Q8BL06 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC11.18□□□□□ -0.62
Usp54Q8BL06 AC122459.3-201ENSMUST00000228508 1042 ntBASIC11.18□□□□□ -0.62
Usp54Q8BL06 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Usp54Q8BL06 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Usp54Q8BL06 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Usp54Q8BL06 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Usp54Q8BL06 Ccdc116-201ENSMUST00000023452 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Usp54Q8BL06 Ncor1-202ENSMUST00000037575 4246 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Usp54Q8BL06 Gm37536-201ENSMUST00000194710 2491 ntBASIC11.18□□□□□ -0.62
Usp54Q8BL06 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC11.18□□□□□ -0.62
Usp54Q8BL06 Patj-206ENSMUST00000107033 3624 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Usp54Q8BL06 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Usp54Q8BL06 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Usp54Q8BL06 4921509C19Rik-201ENSMUST00000080132 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp54Q8BL06 Ncam1-202ENSMUST00000166811 3088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp54Q8BL06 Gm10259-201ENSMUST00000091289 1590 ntBASIC11.17□□□□□ -0.62
Usp54Q8BL06 Dgkg-202ENSMUST00000089925 3555 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp54Q8BL06 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp54Q8BL06 Gm10069-201ENSMUST00000144745 3694 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Usp54Q8BL06 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Usp54Q8BL06 Gm11371-201ENSMUST00000120294 385 ntBASIC11.17□□□□□ -0.62
Usp54Q8BL06 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Usp54Q8BL06 Gm23007-201ENSMUST00000158951 177 ntBASIC11.17□□□□□ -0.62
Usp54Q8BL06 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Usp54Q8BL06 Gm27684-201ENSMUST00000183778 80 ntBASIC11.17□□□□□ -0.62
Usp54Q8BL06 Gm21181-201ENSMUST00000186249 330 ntBASIC11.17□□□□□ -0.62
Usp54Q8BL06 Gm29383-201ENSMUST00000188284 480 ntBASIC11.17□□□□□ -0.62
Usp54Q8BL06 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Usp54Q8BL06 Gm43906-201ENSMUST00000203194 906 ntBASIC11.17□□□□□ -0.62
Usp54Q8BL06 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC11.17□□□□□ -0.62
Usp54Q8BL06 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC11.17□□□□□ -0.62
Usp54Q8BL06 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Usp54Q8BL06 AC238940.2-201ENSMUST00000224202 330 ntBASIC11.17□□□□□ -0.62
Usp54Q8BL06 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Usp54Q8BL06 Gm10123-201ENSMUST00000075723 490 ntBASIC11.17□□□□□ -0.62
Usp54Q8BL06 Ccnb1-202ENSMUST00000091295 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp54Q8BL06 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp54Q8BL06 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp54Q8BL06 Nek6-201ENSMUST00000054234 10338 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp54Q8BL06 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Usp54Q8BL06 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp54Q8BL06 Xntrpc-201ENSMUST00000084843 4173 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Usp54Q8BL06 Olfr126-203ENSMUST00000217487 1859 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Usp54Q8BL06 Stat6-201ENSMUST00000092074 3775 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp54Q8BL06 AC164437.4-202ENSMUST00000228794 2413 ntBASIC11.17□□□□□ -0.62
Usp54Q8BL06 Gm45634-201ENSMUST00000209736 1990 ntBASIC11.17□□□□□ -0.62
Usp54Q8BL06 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp54Q8BL06 L3mbtl2-201ENSMUST00000023029 3487 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp54Q8BL06 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Usp54Q8BL06 Tanc1-203ENSMUST00000112568 7422 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Usp54Q8BL06 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC11.17□□□□□ -0.62
Usp54Q8BL06 Prokr2-202ENSMUST00000110156 3829 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Usp54Q8BL06 Fbxo11-201ENSMUST00000005504 4019 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Usp54Q8BL06 Shc4-201ENSMUST00000042246 4059 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp54Q8BL06 Acer2-201ENSMUST00000045224 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp54Q8BL06 Ankrd55-201ENSMUST00000022275 2412 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp54Q8BL06 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Usp54Q8BL06 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp54Q8BL06 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC11.16□□□□□ -0.62
Usp54Q8BL06 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp54Q8BL06 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Usp54Q8BL06 Gm30646-201ENSMUST00000207662 180 ntBASIC11.16□□□□□ -0.62
Usp54Q8BL06 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Usp54Q8BL06 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC11.16□□□□□ -0.62
Usp54Q8BL06 AC154382.1-201ENSMUST00000220958 1282 ntBASIC11.16□□□□□ -0.62
Usp54Q8BL06 CT010480.3-201ENSMUST00000224712 259 ntBASIC11.16□□□□□ -0.62
Usp54Q8BL06 AC154595.1-201ENSMUST00000225533 1059 ntBASIC11.16□□□□□ -0.62
Usp54Q8BL06 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Usp54Q8BL06 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Usp54Q8BL06 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp54Q8BL06 Gm6614-201ENSMUST00000111832 1953 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Usp54Q8BL06 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Usp54Q8BL06 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp54Q8BL06 Tcf23-201ENSMUST00000006818 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp54Q8BL06 Gm17076-201ENSMUST00000165185 1401 ntBASIC11.16□□□□□ -0.62
Usp54Q8BL06 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC11.16□□□□□ -0.62
Usp54Q8BL06 Adgrf4-203ENSMUST00000167993 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms