Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Nr1i3-208ENSMUST00000155126 2980 ntTSL 2 BASIC7.82□□□□□ -1.16
Cdh23Q99PF4 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Cdh23Q99PF4 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Cdh23Q99PF4 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Cdh23Q99PF4 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Cdh23Q99PF4 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Cdh23Q99PF4 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Cdh23Q99PF4 Gm12870-201ENSMUST00000121383 1016 ntBASIC7.82□□□□□ -1.16
Cdh23Q99PF4 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Cdh23Q99PF4 Gm28801-201ENSMUST00000188761 449 ntBASIC7.82□□□□□ -1.16
Cdh23Q99PF4 Gm29145-201ENSMUST00000189914 456 ntBASIC7.82□□□□□ -1.16
Cdh23Q99PF4 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC7.82□□□□□ -1.16
Cdh23Q99PF4 Pot1a-209ENSMUST00000166445 1923 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Cdh23Q99PF4 Olfr429-202ENSMUST00000216346 2510 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
Cdh23Q99PF4 Gm2136-201ENSMUST00000193945 2577 ntBASIC7.82□□□□□ -1.16
Cdh23Q99PF4 Gm44013-201ENSMUST00000204392 2262 ntBASIC7.82□□□□□ -1.16
Cdh23Q99PF4 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
Cdh23Q99PF4 Gm23701-201ENSMUST00000103893 110 ntBASIC7.82□□□□□ -1.16
Cdh23Q99PF4 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Cdh23Q99PF4 Gm20072-201ENSMUST00000202231 292 ntBASIC7.82□□□□□ -1.16
Cdh23Q99PF4 Gm9357-201ENSMUST00000207138 805 ntBASIC7.82□□□□□ -1.16
Cdh23Q99PF4 Gm19340-201ENSMUST00000221995 345 ntBASIC7.82□□□□□ -1.16
Cdh23Q99PF4 n-R5s29-201ENSMUST00000082836 119 ntBASIC7.82□□□□□ -1.16
Cdh23Q99PF4 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Cdh23Q99PF4 Pkd2l1-201ENSMUST00000042026 3321 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Cdh23Q99PF4 Crtam-201ENSMUST00000034519 1876 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Ankrd55-201ENSMUST00000022275 2412 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Sepsecs-201ENSMUST00000031069 5252 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Stam-201ENSMUST00000028050 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Gm13798-201ENSMUST00000118285 139 ntBASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Gm27804-201ENSMUST00000185135 119 ntBASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Gm21181-201ENSMUST00000186249 330 ntBASIC7.81□□□□□ -1.16
Cdh23Q99PF4 AC122844.1-201ENSMUST00000195971 107 ntBASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 CT030166.4-201ENSMUST00000220640 404 ntBASIC7.81□□□□□ -1.16
Cdh23Q99PF4 AC238940.2-201ENSMUST00000224202 330 ntBASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Gm45515-201ENSMUST00000210796 2141 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Dlk1-206ENSMUST00000109846 4106 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Galk2-201ENSMUST00000028636 2605 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Gm45797-201ENSMUST00000212759 1921 ntBASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Gm12152-201ENSMUST00000122465 684 ntBASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Gm8512-201ENSMUST00000215367 471 ntBASIC7.81□□□□□ -1.16
Cdh23Q99PF4 1810014B01Rik-205ENSMUST00000218691 323 ntTSL 3 BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Lamb3-201ENSMUST00000016315 4056 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Zfp74-201ENSMUST00000032797 2040 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Fhl1-205ENSMUST00000114773 2298 ntTSL 5 BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Sycp2l-201ENSMUST00000124093 2641 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 Fbxo38-201ENSMUST00000048688 4388 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cdh23Q99PF4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC7.8□□□□□ -1.16
Cdh23Q99PF4 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Cdh23Q99PF4 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Cdh23Q99PF4 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC7.8□□□□□ -1.16
Cdh23Q99PF4 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Cdh23Q99PF4 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC7.8□□□□□ -1.16
Cdh23Q99PF4 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Cdh23Q99PF4 Mrpl11-201ENSMUST00000025836 2882 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cdh23Q99PF4 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Cdh23Q99PF4 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cdh23Q99PF4 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cdh23Q99PF4 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Cdh23Q99PF4 Ccnyl1-201ENSMUST00000094898 2923 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Cdh23Q99PF4 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cdh23Q99PF4 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Cdh23Q99PF4 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Cdh23Q99PF4 Six6-201ENSMUST00000021519 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cdh23Q99PF4 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Cdh23Q99PF4 Gm14375-201ENSMUST00000119490 855 ntBASIC7.8□□□□□ -1.16
Cdh23Q99PF4 Gm15618-201ENSMUST00000121610 452 ntBASIC7.8□□□□□ -1.16
Cdh23Q99PF4 Gm12778-201ENSMUST00000122341 333 ntBASIC7.8□□□□□ -1.16
Cdh23Q99PF4 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cdh23Q99PF4 Gm16212-201ENSMUST00000136190 282 ntTSL 5 BASIC7.8□□□□□ -1.16
Cdh23Q99PF4 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Cdh23Q99PF4 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC7.8□□□□□ -1.16
Cdh23Q99PF4 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC7.8□□□□□ -1.16
Cdh23Q99PF4 Lrrc29-204ENSMUST00000210801 3830 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms