Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC10.41□□□□□ -0.74
Col18a1P39061 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC10.41□□□□□ -0.74
Col18a1P39061 F730016J06Rik-202ENSMUST00000128888 3699 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Col18a1P39061 Eapp-204ENSMUST00000161592 4186 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Col18a1P39061 Slc25a30-201ENSMUST00000022580 3588 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Col18a1P39061 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Col18a1P39061 Gm12468-201ENSMUST00000116189 404 ntBASIC10.41□□□□□ -0.74
Col18a1P39061 Gm11889-201ENSMUST00000118402 1079 ntBASIC10.41□□□□□ -0.74
Col18a1P39061 Gm13900-201ENSMUST00000119402 498 ntBASIC10.41□□□□□ -0.74
Col18a1P39061 Gm8421-201ENSMUST00000119439 305 ntBASIC10.41□□□□□ -0.74
Col18a1P39061 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC10.41□□□□□ -0.74
Col18a1P39061 Gm22223-201ENSMUST00000157360 125 ntBASIC10.41□□□□□ -0.74
Col18a1P39061 Mir7033-201ENSMUST00000184259 81 ntBASIC10.41□□□□□ -0.74
Col18a1P39061 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Col18a1P39061 Gm42734-201ENSMUST00000201656 878 ntBASIC10.41□□□□□ -0.74
Col18a1P39061 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC10.41□□□□□ -0.74
Col18a1P39061 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC10.41□□□□□ -0.74
Col18a1P39061 AC153152.2-201ENSMUST00000223165 959 ntBASIC10.41□□□□□ -0.74
Col18a1P39061 n-R5s169-201ENSMUST00000083110 120 ntBASIC10.41□□□□□ -0.74
Col18a1P39061 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Col18a1P39061 Sin3a-207ENSMUST00000168502 4899 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Col18a1P39061 Atp2b2-202ENSMUST00000101044 4586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Col18a1P39061 Olfr523-203ENSMUST00000213953 3445 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Col18a1P39061 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Col18a1P39061 Gm45634-201ENSMUST00000209736 1990 ntBASIC10.41□□□□□ -0.74
Col18a1P39061 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Col18a1P39061 Lif-202ENSMUST00000066283 4026 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Col18a1P39061 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Col18a1P39061 Zbtb26-201ENSMUST00000067043 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Col18a1P39061 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC10.4□□□□□ -0.74
Col18a1P39061 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC10.4□□□□□ -0.74
Col18a1P39061 Slc2a9-202ENSMUST00000067872 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col18a1P39061 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col18a1P39061 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col18a1P39061 A3galt2-201ENSMUST00000030585 3390 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col18a1P39061 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col18a1P39061 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC10.4□□□□□ -0.74
Col18a1P39061 Tdrd3-205ENSMUST00000170865 2530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col18a1P39061 Abhd4-202ENSMUST00000180359 2508 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col18a1P39061 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col18a1P39061 Timeless-203ENSMUST00000105242 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col18a1P39061 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Col18a1P39061 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Col18a1P39061 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Col18a1P39061 Gm15484-201ENSMUST00000118871 828 ntBASIC10.4□□□□□ -0.74
Col18a1P39061 Gm12890-201ENSMUST00000120885 373 ntBASIC10.4□□□□□ -0.74
Col18a1P39061 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC10.4□□□□□ -0.74
Col18a1P39061 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC10.4□□□□□ -0.74
Col18a1P39061 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Col18a1P39061 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC10.4□□□□□ -0.74
Col18a1P39061 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Col18a1P39061 Gm10410-201ENSMUST00000180138 384 ntBASIC10.4□□□□□ -0.74
Col18a1P39061 Gm26898-201ENSMUST00000181678 384 ntBASIC10.4□□□□□ -0.74
Col18a1P39061 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC10.4□□□□□ -0.74
Col18a1P39061 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Col18a1P39061 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC10.4□□□□□ -0.74
Col18a1P39061 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC10.4□□□□□ -0.74
Col18a1P39061 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC10.4□□□□□ -0.74
Col18a1P39061 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC10.4□□□□□ -0.74
Col18a1P39061 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC10.4□□□□□ -0.74
Col18a1P39061 CT030182.4-201ENSMUST00000223647 645 ntBASIC10.4□□□□□ -0.74
Col18a1P39061 AC110176.1-201ENSMUST00000226219 504 ntBASIC10.4□□□□□ -0.74
Col18a1P39061 n-R5s29-201ENSMUST00000082836 119 ntBASIC10.4□□□□□ -0.74
Col18a1P39061 Gm29486-201ENSMUST00000088648 372 ntBASIC10.4□□□□□ -0.74
Col18a1P39061 Tmem63c-201ENSMUST00000110187 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col18a1P39061 Gm10390-201ENSMUST00000180812 3975 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Col18a1P39061 Napb-201ENSMUST00000028926 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col18a1P39061 4930402H05Rik-201ENSMUST00000203115 2829 ntBASIC10.4□□□□□ -0.74
Col18a1P39061 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.4□□□□□ -0.74
Col18a1P39061 Cd99l2-203ENSMUST00000114586 3459 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Col18a1P39061 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Col18a1P39061 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col18a1P39061 Srp72-201ENSMUST00000101087 3625 ntAPPRIS P2 TSL 2 BASIC10.4□□□□□ -0.74
Col18a1P39061 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col18a1P39061 Gprasp2-211ENSMUST00000173804 3814 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col18a1P39061 Cwc22-204ENSMUST00000111821 3388 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
Col18a1P39061 Gm14976-201ENSMUST00000117055 1394 ntBASIC10.4□□□□□ -0.75
Col18a1P39061 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Col18a1P39061 Ebf2-201ENSMUST00000022637 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Col18a1P39061 Nfatc1-201ENSMUST00000035800 4505 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Col18a1P39061 Ap1s3-203ENSMUST00000162342 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col18a1P39061 Gm11690-201ENSMUST00000128183 1856 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Col18a1P39061 Gm17170-201ENSMUST00000112785 316 ntBASIC10.39□□□□□ -0.75
Col18a1P39061 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC10.39□□□□□ -0.75
Col18a1P39061 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Col18a1P39061 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Col18a1P39061 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC10.39□□□□□ -0.75
Col18a1P39061 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Col18a1P39061 Gm18952-201ENSMUST00000194471 846 ntBASIC10.39□□□□□ -0.75
Col18a1P39061 Gm43048-201ENSMUST00000196101 388 ntBASIC10.39□□□□□ -0.75
Col18a1P39061 Gm18593-201ENSMUST00000200754 1139 ntBASIC10.39□□□□□ -0.75
Col18a1P39061 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col18a1P39061 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC10.39□□□□□ -0.75
Col18a1P39061 Gm22362-201ENSMUST00000083102 134 ntBASIC10.39□□□□□ -0.75
Col18a1P39061 Tro-207ENSMUST00000163969 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col18a1P39061 Gm16130-201ENSMUST00000153106 2799 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Col18a1P39061 Vmn2r92-201ENSMUST00000169686 2583 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Col18a1P39061 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Col18a1P39061 Rnf43-201ENSMUST00000040089 3670 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Col18a1P39061 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms