Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
H2afb2S4R1M3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb2S4R1M3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
H2afb2S4R1M3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
H2afb2S4R1M3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb2S4R1M3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb2S4R1M3 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.76■□□□□ 0.59
H2afb2S4R1M3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb2S4R1M3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb2S4R1M3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb2S4R1M3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb2S4R1M3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb2S4R1M3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
H2afb2S4R1M3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb2S4R1M3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.75■□□□□ 0.59
H2afb2S4R1M3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.75■□□□□ 0.59
H2afb2S4R1M3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.75■□□□□ 0.59
H2afb2S4R1M3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.75■□□□□ 0.59
H2afb2S4R1M3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb2S4R1M3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb2S4R1M3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb2S4R1M3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb2S4R1M3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb2S4R1M3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb2S4R1M3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb2S4R1M3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb2S4R1M3 Reep4-203ENSMUST00000226563 1444 ntBASIC18.74■□□□□ 0.59
H2afb2S4R1M3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb2S4R1M3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb2S4R1M3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb2S4R1M3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb2S4R1M3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb2S4R1M3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb2S4R1M3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb2S4R1M3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb2S4R1M3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.74■□□□□ 0.59
H2afb2S4R1M3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb2S4R1M3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb2S4R1M3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.74■□□□□ 0.59
H2afb2S4R1M3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb2S4R1M3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb2S4R1M3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb2S4R1M3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb2S4R1M3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb2S4R1M3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb2S4R1M3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
H2afb2S4R1M3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
H2afb2S4R1M3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.73■□□□□ 0.59
H2afb2S4R1M3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
H2afb2S4R1M3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
H2afb2S4R1M3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
H2afb2S4R1M3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
H2afb2S4R1M3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
H2afb2S4R1M3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
H2afb2S4R1M3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
H2afb2S4R1M3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
H2afb2S4R1M3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
H2afb2S4R1M3 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.73■□□□□ 0.59
H2afb2S4R1M3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
H2afb2S4R1M3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
H2afb2S4R1M3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.73■□□□□ 0.59
H2afb2S4R1M3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
H2afb2S4R1M3 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.73■□□□□ 0.59
H2afb2S4R1M3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb2S4R1M3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb2S4R1M3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb2S4R1M3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb2S4R1M3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb2S4R1M3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb2S4R1M3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb2S4R1M3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb2S4R1M3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb2S4R1M3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb2S4R1M3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb2S4R1M3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.72■□□□□ 0.59
H2afb2S4R1M3 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.72■□□□□ 0.59
H2afb2S4R1M3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb2S4R1M3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
H2afb2S4R1M3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb2S4R1M3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb2S4R1M3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
H2afb2S4R1M3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb2S4R1M3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb2S4R1M3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb2S4R1M3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb2S4R1M3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb2S4R1M3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb2S4R1M3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb2S4R1M3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb2S4R1M3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2afb2S4R1M3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
H2afb2S4R1M3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.71■□□□□ 0.59
H2afb2S4R1M3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
H2afb2S4R1M3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2afb2S4R1M3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
H2afb2S4R1M3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.71■□□□□ 0.59
H2afb2S4R1M3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.71■□□□□ 0.59
H2afb2S4R1M3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2afb2S4R1M3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2afb2S4R1M3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms