Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Upk1bQ9Z2C6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Upk1bQ9Z2C6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Upk1bQ9Z2C6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Upk1bQ9Z2C6 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Upk1bQ9Z2C6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Upk1bQ9Z2C6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Upk1bQ9Z2C6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Upk1bQ9Z2C6 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Upk1bQ9Z2C6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.38■□□□□ 0.37
Upk1bQ9Z2C6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.38■□□□□ 0.37
Upk1bQ9Z2C6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Upk1bQ9Z2C6 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.38■□□□□ 0.37
Upk1bQ9Z2C6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upk1bQ9Z2C6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upk1bQ9Z2C6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upk1bQ9Z2C6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Upk1bQ9Z2C6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upk1bQ9Z2C6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upk1bQ9Z2C6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upk1bQ9Z2C6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upk1bQ9Z2C6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Upk1bQ9Z2C6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk1bQ9Z2C6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk1bQ9Z2C6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk1bQ9Z2C6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk1bQ9Z2C6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Upk1bQ9Z2C6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk1bQ9Z2C6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.37■□□□□ 0.37
Upk1bQ9Z2C6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk1bQ9Z2C6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.37■□□□□ 0.37
Upk1bQ9Z2C6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
Upk1bQ9Z2C6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.37■□□□□ 0.37
Upk1bQ9Z2C6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk1bQ9Z2C6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk1bQ9Z2C6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk1bQ9Z2C6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk1bQ9Z2C6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk1bQ9Z2C6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Upk1bQ9Z2C6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk1bQ9Z2C6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Upk1bQ9Z2C6 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.36■□□□□ 0.37
Upk1bQ9Z2C6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk1bQ9Z2C6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk1bQ9Z2C6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Upk1bQ9Z2C6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
Upk1bQ9Z2C6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk1bQ9Z2C6 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Upk1bQ9Z2C6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Upk1bQ9Z2C6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Upk1bQ9Z2C6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk1bQ9Z2C6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upk1bQ9Z2C6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.35■□□□□ 0.37
Upk1bQ9Z2C6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Upk1bQ9Z2C6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.35■□□□□ 0.37
Upk1bQ9Z2C6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upk1bQ9Z2C6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upk1bQ9Z2C6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Upk1bQ9Z2C6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Upk1bQ9Z2C6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upk1bQ9Z2C6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Upk1bQ9Z2C6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Upk1bQ9Z2C6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upk1bQ9Z2C6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upk1bQ9Z2C6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upk1bQ9Z2C6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Upk1bQ9Z2C6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Upk1bQ9Z2C6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Upk1bQ9Z2C6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.34■□□□□ 0.37
Upk1bQ9Z2C6 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.34■□□□□ 0.37
Upk1bQ9Z2C6 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upk1bQ9Z2C6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Upk1bQ9Z2C6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upk1bQ9Z2C6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Upk1bQ9Z2C6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Upk1bQ9Z2C6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.33■□□□□ 0.37
Upk1bQ9Z2C6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Upk1bQ9Z2C6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Upk1bQ9Z2C6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Upk1bQ9Z2C6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Upk1bQ9Z2C6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Upk1bQ9Z2C6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Upk1bQ9Z2C6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Upk1bQ9Z2C6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Upk1bQ9Z2C6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Upk1bQ9Z2C6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.33■□□□□ 0.36
Upk1bQ9Z2C6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.33■□□□□ 0.36
Upk1bQ9Z2C6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Upk1bQ9Z2C6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Upk1bQ9Z2C6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Upk1bQ9Z2C6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Upk1bQ9Z2C6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Upk1bQ9Z2C6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Upk1bQ9Z2C6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Upk1bQ9Z2C6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk1bQ9Z2C6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Upk1bQ9Z2C6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk1bQ9Z2C6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Upk1bQ9Z2C6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk1bQ9Z2C6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms