Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nr1h3Q9Z0Y9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nr1h3Q9Z0Y9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.35■□□□□ 0.85
Nr1h3Q9Z0Y9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nr1h3Q9Z0Y9 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.34■□□□□ 0.85
Nr1h3Q9Z0Y9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Nr1h3Q9Z0Y9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.34■□□□□ 0.85
Nr1h3Q9Z0Y9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nr1h3Q9Z0Y9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.34■□□□□ 0.85
Nr1h3Q9Z0Y9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nr1h3Q9Z0Y9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nr1h3Q9Z0Y9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Nr1h3Q9Z0Y9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nr1h3Q9Z0Y9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nr1h3Q9Z0Y9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nr1h3Q9Z0Y9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Nr1h3Q9Z0Y9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nr1h3Q9Z0Y9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.33■□□□□ 0.85
Nr1h3Q9Z0Y9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.33■□□□□ 0.85
Nr1h3Q9Z0Y9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nr1h3Q9Z0Y9 Gm10252-201ENSMUST00000209541 832 ntBASIC20.33■□□□□ 0.85
Nr1h3Q9Z0Y9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nr1h3Q9Z0Y9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nr1h3Q9Z0Y9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nr1h3Q9Z0Y9 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.33■□□□□ 0.84
Nr1h3Q9Z0Y9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nr1h3Q9Z0Y9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nr1h3Q9Z0Y9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Nr1h3Q9Z0Y9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.33■□□□□ 0.84
Nr1h3Q9Z0Y9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nr1h3Q9Z0Y9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nr1h3Q9Z0Y9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nr1h3Q9Z0Y9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nr1h3Q9Z0Y9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nr1h3Q9Z0Y9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nr1h3Q9Z0Y9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nr1h3Q9Z0Y9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Nr1h3Q9Z0Y9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nr1h3Q9Z0Y9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nr1h3Q9Z0Y9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.32■□□□□ 0.84
Nr1h3Q9Z0Y9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Nr1h3Q9Z0Y9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nr1h3Q9Z0Y9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nr1h3Q9Z0Y9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nr1h3Q9Z0Y9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nr1h3Q9Z0Y9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.31■□□□□ 0.84
Nr1h3Q9Z0Y9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Nr1h3Q9Z0Y9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nr1h3Q9Z0Y9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1h3Q9Z0Y9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1h3Q9Z0Y9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1h3Q9Z0Y9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1h3Q9Z0Y9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.3■□□□□ 0.84
Nr1h3Q9Z0Y9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1h3Q9Z0Y9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1h3Q9Z0Y9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1h3Q9Z0Y9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Nr1h3Q9Z0Y9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.3■□□□□ 0.84
Nr1h3Q9Z0Y9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr1h3Q9Z0Y9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr1h3Q9Z0Y9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr1h3Q9Z0Y9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr1h3Q9Z0Y9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr1h3Q9Z0Y9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr1h3Q9Z0Y9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Nr1h3Q9Z0Y9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr1h3Q9Z0Y9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nr1h3Q9Z0Y9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nr1h3Q9Z0Y9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.28■□□□□ 0.84
Nr1h3Q9Z0Y9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Nr1h3Q9Z0Y9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Nr1h3Q9Z0Y9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nr1h3Q9Z0Y9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nr1h3Q9Z0Y9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nr1h3Q9Z0Y9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Nr1h3Q9Z0Y9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Nr1h3Q9Z0Y9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nr1h3Q9Z0Y9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nr1h3Q9Z0Y9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nr1h3Q9Z0Y9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nr1h3Q9Z0Y9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nr1h3Q9Z0Y9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nr1h3Q9Z0Y9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nr1h3Q9Z0Y9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nr1h3Q9Z0Y9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Nr1h3Q9Z0Y9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nr1h3Q9Z0Y9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nr1h3Q9Z0Y9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nr1h3Q9Z0Y9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nr1h3Q9Z0Y9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Nr1h3Q9Z0Y9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nr1h3Q9Z0Y9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nr1h3Q9Z0Y9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.25■□□□□ 0.83
Nr1h3Q9Z0Y9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nr1h3Q9Z0Y9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nr1h3Q9Z0Y9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nr1h3Q9Z0Y9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nr1h3Q9Z0Y9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nr1h3Q9Z0Y9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nr1h3Q9Z0Y9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms