Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Cldn3Q9Z0G9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn3Q9Z0G9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Cldn3Q9Z0G9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.94■□□□□ 0.62
Cldn3Q9Z0G9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cldn3Q9Z0G9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn3Q9Z0G9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn3Q9Z0G9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Cldn3Q9Z0G9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn3Q9Z0G9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Cldn3Q9Z0G9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn3Q9Z0G9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.93■□□□□ 0.62
Cldn3Q9Z0G9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn3Q9Z0G9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn3Q9Z0G9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn3Q9Z0G9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.93■□□□□ 0.62
Cldn3Q9Z0G9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn3Q9Z0G9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn3Q9Z0G9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn3Q9Z0G9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.93■□□□□ 0.62
Cldn3Q9Z0G9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.93■□□□□ 0.62
Cldn3Q9Z0G9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
Cldn3Q9Z0G9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.93■□□□□ 0.62
Cldn3Q9Z0G9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn3Q9Z0G9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn3Q9Z0G9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn3Q9Z0G9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn3Q9Z0G9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn3Q9Z0G9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn3Q9Z0G9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn3Q9Z0G9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.92■□□□□ 0.62
Cldn3Q9Z0G9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.92■□□□□ 0.62
Cldn3Q9Z0G9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn3Q9Z0G9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn3Q9Z0G9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn3Q9Z0G9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn3Q9Z0G9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn3Q9Z0G9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn3Q9Z0G9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn3Q9Z0G9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.91■□□□□ 0.62
Cldn3Q9Z0G9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn3Q9Z0G9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn3Q9Z0G9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn3Q9Z0G9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn3Q9Z0G9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.91■□□□□ 0.62
Cldn3Q9Z0G9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn3Q9Z0G9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn3Q9Z0G9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn3Q9Z0G9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn3Q9Z0G9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Cldn3Q9Z0G9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Cldn3Q9Z0G9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn3Q9Z0G9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn3Q9Z0G9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cldn3Q9Z0G9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.9■□□□□ 0.62
Cldn3Q9Z0G9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cldn3Q9Z0G9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cldn3Q9Z0G9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cldn3Q9Z0G9 Gm13534-201ENSMUST00000121169 513 ntBASIC18.9■□□□□ 0.62
Cldn3Q9Z0G9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cldn3Q9Z0G9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cldn3Q9Z0G9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cldn3Q9Z0G9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cldn3Q9Z0G9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cldn3Q9Z0G9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Cldn3Q9Z0G9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cldn3Q9Z0G9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cldn3Q9Z0G9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cldn3Q9Z0G9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.89■□□□□ 0.61
Cldn3Q9Z0G9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cldn3Q9Z0G9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cldn3Q9Z0G9 AV356131-201ENSMUST00000206201 750 ntBASIC18.89■□□□□ 0.61
Cldn3Q9Z0G9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cldn3Q9Z0G9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Cldn3Q9Z0G9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cldn3Q9Z0G9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cldn3Q9Z0G9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cldn3Q9Z0G9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn3Q9Z0G9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn3Q9Z0G9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn3Q9Z0G9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn3Q9Z0G9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
Cldn3Q9Z0G9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn3Q9Z0G9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn3Q9Z0G9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn3Q9Z0G9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn3Q9Z0G9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn3Q9Z0G9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Cldn3Q9Z0G9 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.88■□□□□ 0.61
Cldn3Q9Z0G9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.87■□□□□ 0.61
Cldn3Q9Z0G9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn3Q9Z0G9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn3Q9Z0G9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn3Q9Z0G9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn3Q9Z0G9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn3Q9Z0G9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.87■□□□□ 0.61
Cldn3Q9Z0G9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn3Q9Z0G9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn3Q9Z0G9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn3Q9Z0G9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms