Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ClcnkaQ9WUB7 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.21■□□□□ 0.34
ClcnkaQ9WUB7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
ClcnkaQ9WUB7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
ClcnkaQ9WUB7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.2■□□□□ 0.34
ClcnkaQ9WUB7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ClcnkaQ9WUB7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ClcnkaQ9WUB7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ClcnkaQ9WUB7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ClcnkaQ9WUB7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.2■□□□□ 0.34
ClcnkaQ9WUB7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ClcnkaQ9WUB7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ClcnkaQ9WUB7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.2■□□□□ 0.34
ClcnkaQ9WUB7 Gm38205-201ENSMUST00000192243 258 ntBASIC17.2■□□□□ 0.34
ClcnkaQ9WUB7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.2■□□□□ 0.34
ClcnkaQ9WUB7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ClcnkaQ9WUB7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ClcnkaQ9WUB7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ClcnkaQ9WUB7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ClcnkaQ9WUB7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ClcnkaQ9WUB7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
ClcnkaQ9WUB7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ClcnkaQ9WUB7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ClcnkaQ9WUB7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ClcnkaQ9WUB7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ClcnkaQ9WUB7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.19■□□□□ 0.34
ClcnkaQ9WUB7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.19■□□□□ 0.34
ClcnkaQ9WUB7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.19■□□□□ 0.34
ClcnkaQ9WUB7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ClcnkaQ9WUB7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ClcnkaQ9WUB7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
ClcnkaQ9WUB7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ClcnkaQ9WUB7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ClcnkaQ9WUB7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ClcnkaQ9WUB7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ClcnkaQ9WUB7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ClcnkaQ9WUB7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ClcnkaQ9WUB7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ClcnkaQ9WUB7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
ClcnkaQ9WUB7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ClcnkaQ9WUB7 Gm10493-201ENSMUST00000097270 612 ntBASIC17.18■□□□□ 0.34
ClcnkaQ9WUB7 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.18■□□□□ 0.34
ClcnkaQ9WUB7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ClcnkaQ9WUB7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ClcnkaQ9WUB7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ClcnkaQ9WUB7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ClcnkaQ9WUB7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ClcnkaQ9WUB7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ClcnkaQ9WUB7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.17■□□□□ 0.34
ClcnkaQ9WUB7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ClcnkaQ9WUB7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ClcnkaQ9WUB7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ClcnkaQ9WUB7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ClcnkaQ9WUB7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ClcnkaQ9WUB7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ClcnkaQ9WUB7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ClcnkaQ9WUB7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ClcnkaQ9WUB7 Gm15039-201ENSMUST00000118914 875 ntBASIC17.17■□□□□ 0.34
ClcnkaQ9WUB7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
ClcnkaQ9WUB7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ClcnkaQ9WUB7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ClcnkaQ9WUB7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ClcnkaQ9WUB7 Reep4-203ENSMUST00000226563 1444 ntBASIC17.17■□□□□ 0.34
ClcnkaQ9WUB7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ClcnkaQ9WUB7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ClcnkaQ9WUB7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ClcnkaQ9WUB7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ClcnkaQ9WUB7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ClcnkaQ9WUB7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ClcnkaQ9WUB7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ClcnkaQ9WUB7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ClcnkaQ9WUB7 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.17■□□□□ 0.34
ClcnkaQ9WUB7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ClcnkaQ9WUB7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.16■□□□□ 0.34
ClcnkaQ9WUB7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ClcnkaQ9WUB7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ClcnkaQ9WUB7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ClcnkaQ9WUB7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.16■□□□□ 0.34
ClcnkaQ9WUB7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ClcnkaQ9WUB7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ClcnkaQ9WUB7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
ClcnkaQ9WUB7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.16■□□□□ 0.34
ClcnkaQ9WUB7 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.16■□□□□ 0.34
ClcnkaQ9WUB7 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.16■□□□□ 0.34
ClcnkaQ9WUB7 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.16■□□□□ 0.34
ClcnkaQ9WUB7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.16■□□□□ 0.34
ClcnkaQ9WUB7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ClcnkaQ9WUB7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ClcnkaQ9WUB7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ClcnkaQ9WUB7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.16■□□□□ 0.34
ClcnkaQ9WUB7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ClcnkaQ9WUB7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ClcnkaQ9WUB7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ClcnkaQ9WUB7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ClcnkaQ9WUB7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClcnkaQ9WUB7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
ClcnkaQ9WUB7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ClcnkaQ9WUB7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ClcnkaQ9WUB7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClcnkaQ9WUB7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms