Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps29Q9QZ88 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps29Q9QZ88 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps29Q9QZ88 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Vps29Q9QZ88 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps29Q9QZ88 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Vps29Q9QZ88 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps29Q9QZ88 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps29Q9QZ88 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Vps29Q9QZ88 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps29Q9QZ88 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Vps29Q9QZ88 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.95■□□□□ 0.46
Vps29Q9QZ88 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps29Q9QZ88 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps29Q9QZ88 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps29Q9QZ88 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps29Q9QZ88 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps29Q9QZ88 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps29Q9QZ88 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps29Q9QZ88 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps29Q9QZ88 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps29Q9QZ88 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps29Q9QZ88 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.94■□□□□ 0.46
Vps29Q9QZ88 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.94■□□□□ 0.46
Vps29Q9QZ88 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps29Q9QZ88 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps29Q9QZ88 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps29Q9QZ88 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps29Q9QZ88 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps29Q9QZ88 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps29Q9QZ88 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps29Q9QZ88 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps29Q9QZ88 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps29Q9QZ88 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps29Q9QZ88 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.93■□□□□ 0.46
Vps29Q9QZ88 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps29Q9QZ88 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.93■□□□□ 0.46
Vps29Q9QZ88 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps29Q9QZ88 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps29Q9QZ88 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.93■□□□□ 0.46
Vps29Q9QZ88 Gm38205-201ENSMUST00000192243 258 ntBASIC17.93■□□□□ 0.46
Vps29Q9QZ88 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.93■□□□□ 0.46
Vps29Q9QZ88 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.93■□□□□ 0.46
Vps29Q9QZ88 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps29Q9QZ88 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps29Q9QZ88 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps29Q9QZ88 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps29Q9QZ88 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Vps29Q9QZ88 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps29Q9QZ88 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps29Q9QZ88 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps29Q9QZ88 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps29Q9QZ88 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps29Q9QZ88 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Vps29Q9QZ88 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.92■□□□□ 0.46
Vps29Q9QZ88 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.92■□□□□ 0.46
Vps29Q9QZ88 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps29Q9QZ88 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Vps29Q9QZ88 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps29Q9QZ88 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps29Q9QZ88 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps29Q9QZ88 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
Vps29Q9QZ88 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps29Q9QZ88 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps29Q9QZ88 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps29Q9QZ88 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Vps29Q9QZ88 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vps29Q9QZ88 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vps29Q9QZ88 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vps29Q9QZ88 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps29Q9QZ88 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps29Q9QZ88 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps29Q9QZ88 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps29Q9QZ88 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps29Q9QZ88 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps29Q9QZ88 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps29Q9QZ88 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps29Q9QZ88 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps29Q9QZ88 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps29Q9QZ88 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps29Q9QZ88 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Vps29Q9QZ88 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps29Q9QZ88 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Vps29Q9QZ88 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps29Q9QZ88 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps29Q9QZ88 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Vps29Q9QZ88 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.9■□□□□ 0.46
Vps29Q9QZ88 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vps29Q9QZ88 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Vps29Q9QZ88 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps29Q9QZ88 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps29Q9QZ88 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vps29Q9QZ88 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Vps29Q9QZ88 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.89■□□□□ 0.46
Vps29Q9QZ88 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Vps29Q9QZ88 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Vps29Q9QZ88 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps29Q9QZ88 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps29Q9QZ88 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps29Q9QZ88 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms