Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Zc3h8Q9JJ48 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Zc3h8Q9JJ48 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.38■□□□□ 0.37
Zc3h8Q9JJ48 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zc3h8Q9JJ48 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Zc3h8Q9JJ48 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zc3h8Q9JJ48 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Zc3h8Q9JJ48 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Zc3h8Q9JJ48 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zc3h8Q9JJ48 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Zc3h8Q9JJ48 Gm13148-201ENSMUST00000118892 745 ntBASIC17.38■□□□□ 0.37
Zc3h8Q9JJ48 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zc3h8Q9JJ48 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Zc3h8Q9JJ48 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Zc3h8Q9JJ48 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zc3h8Q9JJ48 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zc3h8Q9JJ48 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zc3h8Q9JJ48 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zc3h8Q9JJ48 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zc3h8Q9JJ48 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Zc3h8Q9JJ48 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h8Q9JJ48 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h8Q9JJ48 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h8Q9JJ48 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Zc3h8Q9JJ48 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h8Q9JJ48 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Zc3h8Q9JJ48 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h8Q9JJ48 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.37■□□□□ 0.37
Zc3h8Q9JJ48 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.37■□□□□ 0.37
Zc3h8Q9JJ48 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.37■□□□□ 0.37
Zc3h8Q9JJ48 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h8Q9JJ48 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h8Q9JJ48 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h8Q9JJ48 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h8Q9JJ48 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h8Q9JJ48 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zc3h8Q9JJ48 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Zc3h8Q9JJ48 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zc3h8Q9JJ48 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zc3h8Q9JJ48 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zc3h8Q9JJ48 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zc3h8Q9JJ48 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Zc3h8Q9JJ48 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
Zc3h8Q9JJ48 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Zc3h8Q9JJ48 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Zc3h8Q9JJ48 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zc3h8Q9JJ48 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zc3h8Q9JJ48 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zc3h8Q9JJ48 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zc3h8Q9JJ48 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Zc3h8Q9JJ48 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h8Q9JJ48 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h8Q9JJ48 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h8Q9JJ48 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h8Q9JJ48 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h8Q9JJ48 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h8Q9JJ48 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.35■□□□□ 0.37
Zc3h8Q9JJ48 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Zc3h8Q9JJ48 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h8Q9JJ48 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h8Q9JJ48 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.35■□□□□ 0.37
Zc3h8Q9JJ48 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Zc3h8Q9JJ48 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h8Q9JJ48 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h8Q9JJ48 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Zc3h8Q9JJ48 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Zc3h8Q9JJ48 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zc3h8Q9JJ48 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Zc3h8Q9JJ48 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Zc3h8Q9JJ48 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zc3h8Q9JJ48 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Zc3h8Q9JJ48 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Zc3h8Q9JJ48 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.34■□□□□ 0.37
Zc3h8Q9JJ48 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Zc3h8Q9JJ48 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zc3h8Q9JJ48 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Zc3h8Q9JJ48 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.34■□□□□ 0.37
Zc3h8Q9JJ48 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zc3h8Q9JJ48 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Zc3h8Q9JJ48 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Zc3h8Q9JJ48 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Zc3h8Q9JJ48 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Zc3h8Q9JJ48 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Zc3h8Q9JJ48 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Zc3h8Q9JJ48 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Zc3h8Q9JJ48 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Zc3h8Q9JJ48 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Zc3h8Q9JJ48 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.33■□□□□ 0.36
Zc3h8Q9JJ48 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.33■□□□□ 0.36
Zc3h8Q9JJ48 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Zc3h8Q9JJ48 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Zc3h8Q9JJ48 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Zc3h8Q9JJ48 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zc3h8Q9JJ48 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zc3h8Q9JJ48 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Zc3h8Q9JJ48 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Zc3h8Q9JJ48 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zc3h8Q9JJ48 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zc3h8Q9JJ48 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zc3h8Q9JJ48 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms