Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim39Q9ESN2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim39Q9ESN2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim39Q9ESN2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Trim39Q9ESN2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim39Q9ESN2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
Trim39Q9ESN2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trim39Q9ESN2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim39Q9ESN2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim39Q9ESN2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim39Q9ESN2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim39Q9ESN2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim39Q9ESN2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim39Q9ESN2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim39Q9ESN2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim39Q9ESN2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.44■□□□□ 0.38
Trim39Q9ESN2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim39Q9ESN2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim39Q9ESN2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim39Q9ESN2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim39Q9ESN2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim39Q9ESN2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim39Q9ESN2 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.44■□□□□ 0.38
Trim39Q9ESN2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim39Q9ESN2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim39Q9ESN2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim39Q9ESN2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim39Q9ESN2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim39Q9ESN2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim39Q9ESN2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim39Q9ESN2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.43■□□□□ 0.38
Trim39Q9ESN2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.43■□□□□ 0.38
Trim39Q9ESN2 Gm43173-201ENSMUST00000202246 593 ntBASIC17.43■□□□□ 0.38
Trim39Q9ESN2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim39Q9ESN2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.43■□□□□ 0.38
Trim39Q9ESN2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim39Q9ESN2 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.43■□□□□ 0.38
Trim39Q9ESN2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.43■□□□□ 0.38
Trim39Q9ESN2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trim39Q9ESN2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim39Q9ESN2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.42■□□□□ 0.38
Trim39Q9ESN2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim39Q9ESN2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trim39Q9ESN2 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.42■□□□□ 0.38
Trim39Q9ESN2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim39Q9ESN2 Gm6139-201ENSMUST00000079261 882 ntBASIC17.42■□□□□ 0.38
Trim39Q9ESN2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim39Q9ESN2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim39Q9ESN2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trim39Q9ESN2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim39Q9ESN2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim39Q9ESN2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Trim39Q9ESN2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim39Q9ESN2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim39Q9ESN2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim39Q9ESN2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim39Q9ESN2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim39Q9ESN2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim39Q9ESN2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim39Q9ESN2 Serp2-204ENSMUST00000228055 705 ntBASIC17.41■□□□□ 0.38
Trim39Q9ESN2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trim39Q9ESN2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trim39Q9ESN2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim39Q9ESN2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim39Q9ESN2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim39Q9ESN2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Trim39Q9ESN2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim39Q9ESN2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim39Q9ESN2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim39Q9ESN2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim39Q9ESN2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim39Q9ESN2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim39Q9ESN2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim39Q9ESN2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim39Q9ESN2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim39Q9ESN2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim39Q9ESN2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.4■□□□□ 0.38
Trim39Q9ESN2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim39Q9ESN2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim39Q9ESN2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim39Q9ESN2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim39Q9ESN2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim39Q9ESN2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim39Q9ESN2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim39Q9ESN2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim39Q9ESN2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim39Q9ESN2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim39Q9ESN2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim39Q9ESN2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.39■□□□□ 0.37
Trim39Q9ESN2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim39Q9ESN2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim39Q9ESN2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim39Q9ESN2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim39Q9ESN2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim39Q9ESN2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim39Q9ESN2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim39Q9ESN2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim39Q9ESN2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim39Q9ESN2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trim39Q9ESN2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms