Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph9Q9D9V4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph9Q9D9V4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rsph9Q9D9V4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph9Q9D9V4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph9Q9D9V4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph9Q9D9V4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph9Q9D9V4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph9Q9D9V4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph9Q9D9V4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph9Q9D9V4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsph9Q9D9V4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph9Q9D9V4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph9Q9D9V4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph9Q9D9V4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph9Q9D9V4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph9Q9D9V4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph9Q9D9V4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph9Q9D9V4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rsph9Q9D9V4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
Rsph9Q9D9V4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph9Q9D9V4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Rsph9Q9D9V4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.34■□□□□ 0.53
Rsph9Q9D9V4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph9Q9D9V4 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.34■□□□□ 0.53
Rsph9Q9D9V4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph9Q9D9V4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph9Q9D9V4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph9Q9D9V4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rsph9Q9D9V4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph9Q9D9V4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph9Q9D9V4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph9Q9D9V4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Rsph9Q9D9V4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rsph9Q9D9V4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.33■□□□□ 0.53
Rsph9Q9D9V4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rsph9Q9D9V4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rsph9Q9D9V4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rsph9Q9D9V4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Rsph9Q9D9V4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rsph9Q9D9V4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Rsph9Q9D9V4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.33■□□□□ 0.52
Rsph9Q9D9V4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rsph9Q9D9V4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.33■□□□□ 0.52
Rsph9Q9D9V4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
Rsph9Q9D9V4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rsph9Q9D9V4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Rsph9Q9D9V4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rsph9Q9D9V4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rsph9Q9D9V4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rsph9Q9D9V4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.32■□□□□ 0.52
Rsph9Q9D9V4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.32■□□□□ 0.52
Rsph9Q9D9V4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rsph9Q9D9V4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rsph9Q9D9V4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.32■□□□□ 0.52
Rsph9Q9D9V4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rsph9Q9D9V4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rsph9Q9D9V4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rsph9Q9D9V4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.31■□□□□ 0.52
Rsph9Q9D9V4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rsph9Q9D9V4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.31■□□□□ 0.52
Rsph9Q9D9V4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rsph9Q9D9V4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rsph9Q9D9V4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rsph9Q9D9V4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rsph9Q9D9V4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Rsph9Q9D9V4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rsph9Q9D9V4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rsph9Q9D9V4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rsph9Q9D9V4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.3■□□□□ 0.52
Rsph9Q9D9V4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rsph9Q9D9V4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rsph9Q9D9V4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rsph9Q9D9V4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rsph9Q9D9V4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rsph9Q9D9V4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rsph9Q9D9V4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rsph9Q9D9V4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rsph9Q9D9V4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rsph9Q9D9V4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rsph9Q9D9V4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rsph9Q9D9V4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rsph9Q9D9V4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rsph9Q9D9V4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rsph9Q9D9V4 Gm12527-201ENSMUST00000117967 564 ntBASIC18.29■□□□□ 0.52
Rsph9Q9D9V4 Gm10653-202ENSMUST00000139570 835 ntBASIC18.29■□□□□ 0.52
Rsph9Q9D9V4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rsph9Q9D9V4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rsph9Q9D9V4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rsph9Q9D9V4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rsph9Q9D9V4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Rsph9Q9D9V4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rsph9Q9D9V4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rsph9Q9D9V4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rsph9Q9D9V4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rsph9Q9D9V4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rsph9Q9D9V4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rsph9Q9D9V4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rsph9Q9D9V4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rsph9Q9D9V4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms