Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.03■□□□□ 0.64
Sf3a3Q9D554 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.03■□□□□ 0.64
Sf3a3Q9D554 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sf3a3Q9D554 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sf3a3Q9D554 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sf3a3Q9D554 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sf3a3Q9D554 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sf3a3Q9D554 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sf3a3Q9D554 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sf3a3Q9D554 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sf3a3Q9D554 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sf3a3Q9D554 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sf3a3Q9D554 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sf3a3Q9D554 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.02■□□□□ 0.64
Sf3a3Q9D554 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sf3a3Q9D554 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sf3a3Q9D554 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Sf3a3Q9D554 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.02■□□□□ 0.64
Sf3a3Q9D554 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.02■□□□□ 0.64
Sf3a3Q9D554 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sf3a3Q9D554 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sf3a3Q9D554 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Sf3a3Q9D554 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sf3a3Q9D554 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sf3a3Q9D554 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a3Q9D554 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.01■□□□□ 0.63
Sf3a3Q9D554 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a3Q9D554 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a3Q9D554 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a3Q9D554 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a3Q9D554 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a3Q9D554 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a3Q9D554 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a3Q9D554 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a3Q9D554 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.01■□□□□ 0.63
Sf3a3Q9D554 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sf3a3Q9D554 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sf3a3Q9D554 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Sf3a3Q9D554 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19■□□□□ 0.63
Sf3a3Q9D554 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19■□□□□ 0.63
Sf3a3Q9D554 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sf3a3Q9D554 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19■□□□□ 0.63
Sf3a3Q9D554 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sf3a3Q9D554 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sf3a3Q9D554 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sf3a3Q9D554 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sf3a3Q9D554 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sf3a3Q9D554 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sf3a3Q9D554 Gm13238-201ENSMUST00000117655 780 ntBASIC18.99■□□□□ 0.63
Sf3a3Q9D554 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.99■□□□□ 0.63
Sf3a3Q9D554 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sf3a3Q9D554 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sf3a3Q9D554 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.99■□□□□ 0.63
Sf3a3Q9D554 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.99■□□□□ 0.63
Sf3a3Q9D554 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Sf3a3Q9D554 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sf3a3Q9D554 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sf3a3Q9D554 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Sf3a3Q9D554 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a3Q9D554 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a3Q9D554 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a3Q9D554 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a3Q9D554 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a3Q9D554 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a3Q9D554 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Sf3a3Q9D554 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.98■□□□□ 0.63
Sf3a3Q9D554 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a3Q9D554 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Sf3a3Q9D554 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a3Q9D554 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a3Q9D554 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a3Q9D554 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a3Q9D554 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.98■□□□□ 0.63
Sf3a3Q9D554 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a3Q9D554 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a3Q9D554 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a3Q9D554 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.97■□□□□ 0.63
Sf3a3Q9D554 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.97■□□□□ 0.63
Sf3a3Q9D554 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sf3a3Q9D554 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sf3a3Q9D554 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sf3a3Q9D554 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sf3a3Q9D554 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sf3a3Q9D554 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.97■□□□□ 0.63
Sf3a3Q9D554 Gm45444-201ENSMUST00000211394 898 ntBASIC18.97■□□□□ 0.63
Sf3a3Q9D554 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sf3a3Q9D554 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Sf3a3Q9D554 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Sf3a3Q9D554 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sf3a3Q9D554 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sf3a3Q9D554 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.96■□□□□ 0.63
Sf3a3Q9D554 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sf3a3Q9D554 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sf3a3Q9D554 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sf3a3Q9D554 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sf3a3Q9D554 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.96■□□□□ 0.63
Sf3a3Q9D554 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.96■□□□□ 0.63
Sf3a3Q9D554 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sf3a3Q9D554 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.96■□□□□ 0.63
Sf3a3Q9D554 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms