Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chaf1bQ9D0N7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chaf1bQ9D0N7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chaf1bQ9D0N7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Chaf1bQ9D0N7 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Chaf1bQ9D0N7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Chaf1bQ9D0N7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chaf1bQ9D0N7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chaf1bQ9D0N7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Chaf1bQ9D0N7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chaf1bQ9D0N7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Chaf1bQ9D0N7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chaf1bQ9D0N7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chaf1bQ9D0N7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.61■□□□□ 0.41
Chaf1bQ9D0N7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1bQ9D0N7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1bQ9D0N7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1bQ9D0N7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1bQ9D0N7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1bQ9D0N7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.61■□□□□ 0.41
Chaf1bQ9D0N7 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.61■□□□□ 0.41
Chaf1bQ9D0N7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1bQ9D0N7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1bQ9D0N7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1bQ9D0N7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1bQ9D0N7 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.6■□□□□ 0.41
Chaf1bQ9D0N7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1bQ9D0N7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1bQ9D0N7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1bQ9D0N7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1bQ9D0N7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1bQ9D0N7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
Chaf1bQ9D0N7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1bQ9D0N7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1bQ9D0N7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Chaf1bQ9D0N7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1bQ9D0N7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1bQ9D0N7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1bQ9D0N7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1bQ9D0N7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1bQ9D0N7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1bQ9D0N7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1bQ9D0N7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1bQ9D0N7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.59■□□□□ 0.41
Chaf1bQ9D0N7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1bQ9D0N7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.59■□□□□ 0.41
Chaf1bQ9D0N7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Chaf1bQ9D0N7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1bQ9D0N7 Gm22238-201ENSMUST00000175222 88 ntBASIC17.59■□□□□ 0.41
Chaf1bQ9D0N7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.59■□□□□ 0.41
Chaf1bQ9D0N7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1bQ9D0N7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1bQ9D0N7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1bQ9D0N7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1bQ9D0N7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Chaf1bQ9D0N7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1bQ9D0N7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1bQ9D0N7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Chaf1bQ9D0N7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chaf1bQ9D0N7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chaf1bQ9D0N7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Chaf1bQ9D0N7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chaf1bQ9D0N7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chaf1bQ9D0N7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.58■□□□□ 0.4
Chaf1bQ9D0N7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Chaf1bQ9D0N7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chaf1bQ9D0N7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chaf1bQ9D0N7 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.58■□□□□ 0.4
Chaf1bQ9D0N7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chaf1bQ9D0N7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chaf1bQ9D0N7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.58■□□□□ 0.4
Chaf1bQ9D0N7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Chaf1bQ9D0N7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chaf1bQ9D0N7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chaf1bQ9D0N7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chaf1bQ9D0N7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chaf1bQ9D0N7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Chaf1bQ9D0N7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Chaf1bQ9D0N7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1bQ9D0N7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1bQ9D0N7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1bQ9D0N7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1bQ9D0N7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1bQ9D0N7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.57■□□□□ 0.4
Chaf1bQ9D0N7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1bQ9D0N7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1bQ9D0N7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1bQ9D0N7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1bQ9D0N7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1bQ9D0N7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chaf1bQ9D0N7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Chaf1bQ9D0N7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chaf1bQ9D0N7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chaf1bQ9D0N7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chaf1bQ9D0N7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Chaf1bQ9D0N7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.56■□□□□ 0.4
Chaf1bQ9D0N7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.56■□□□□ 0.4
Chaf1bQ9D0N7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.56■□□□□ 0.4
Chaf1bQ9D0N7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.56■□□□□ 0.4
Chaf1bQ9D0N7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms