Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lysmd1Q9D0E3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lysmd1Q9D0E3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lysmd1Q9D0E3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lysmd1Q9D0E3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.27■□□□□ 0.84
Lysmd1Q9D0E3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lysmd1Q9D0E3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lysmd1Q9D0E3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lysmd1Q9D0E3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lysmd1Q9D0E3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lysmd1Q9D0E3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Lysmd1Q9D0E3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lysmd1Q9D0E3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lysmd1Q9D0E3 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lysmd1Q9D0E3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Lysmd1Q9D0E3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Lysmd1Q9D0E3 Gm18115-201ENSMUST00000221209 621 ntBASIC20.26■□□□□ 0.83
Lysmd1Q9D0E3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lysmd1Q9D0E3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lysmd1Q9D0E3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lysmd1Q9D0E3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lysmd1Q9D0E3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lysmd1Q9D0E3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lysmd1Q9D0E3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lysmd1Q9D0E3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Lysmd1Q9D0E3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lysmd1Q9D0E3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lysmd1Q9D0E3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lysmd1Q9D0E3 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.24■□□□□ 0.83
Lysmd1Q9D0E3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd1Q9D0E3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Lysmd1Q9D0E3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd1Q9D0E3 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd1Q9D0E3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd1Q9D0E3 Gm15375-201ENSMUST00000119510 849 ntBASIC20.24■□□□□ 0.83
Lysmd1Q9D0E3 Gm28659-201ENSMUST00000188013 759 ntBASIC20.24■□□□□ 0.83
Lysmd1Q9D0E3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd1Q9D0E3 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC20.24■□□□□ 0.83
Lysmd1Q9D0E3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd1Q9D0E3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd1Q9D0E3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd1Q9D0E3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd1Q9D0E3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd1Q9D0E3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lysmd1Q9D0E3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lysmd1Q9D0E3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lysmd1Q9D0E3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lysmd1Q9D0E3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lysmd1Q9D0E3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC20.23■□□□□ 0.83
Lysmd1Q9D0E3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lysmd1Q9D0E3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lysmd1Q9D0E3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lysmd1Q9D0E3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.23■□□□□ 0.83
Lysmd1Q9D0E3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lysmd1Q9D0E3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lysmd1Q9D0E3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lysmd1Q9D0E3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lysmd1Q9D0E3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lysmd1Q9D0E3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.22■□□□□ 0.83
Lysmd1Q9D0E3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.22■□□□□ 0.83
Lysmd1Q9D0E3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lysmd1Q9D0E3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lysmd1Q9D0E3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.22■□□□□ 0.83
Lysmd1Q9D0E3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lysmd1Q9D0E3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Lysmd1Q9D0E3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Lysmd1Q9D0E3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Lysmd1Q9D0E3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Lysmd1Q9D0E3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC20.21■□□□□ 0.83
Lysmd1Q9D0E3 Gm29518-201ENSMUST00000190858 372 ntBASIC20.21■□□□□ 0.83
Lysmd1Q9D0E3 Gm5587-201ENSMUST00000206270 674 ntBASIC20.21■□□□□ 0.83
Lysmd1Q9D0E3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lysmd1Q9D0E3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lysmd1Q9D0E3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lysmd1Q9D0E3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lysmd1Q9D0E3 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.2■□□□□ 0.82
Lysmd1Q9D0E3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.2■□□□□ 0.82
Lysmd1Q9D0E3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC20.2■□□□□ 0.82
Lysmd1Q9D0E3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lysmd1Q9D0E3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Lysmd1Q9D0E3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lysmd1Q9D0E3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lysmd1Q9D0E3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lysmd1Q9D0E3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lysmd1Q9D0E3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lysmd1Q9D0E3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lysmd1Q9D0E3 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lysmd1Q9D0E3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lysmd1Q9D0E3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Lysmd1Q9D0E3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.19■□□□□ 0.82
Lysmd1Q9D0E3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Lysmd1Q9D0E3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Lysmd1Q9D0E3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Lysmd1Q9D0E3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Lysmd1Q9D0E3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.19■□□□□ 0.82
Lysmd1Q9D0E3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC20.19■□□□□ 0.82
Lysmd1Q9D0E3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lysmd1Q9D0E3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.19■□□□□ 0.82
Lysmd1Q9D0E3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lysmd1Q9D0E3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms