Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim13Q9CYB0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim13Q9CYB0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim13Q9CYB0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim13Q9CYB0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trim13Q9CYB0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.29■□□□□ 0.36
Trim13Q9CYB0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
Trim13Q9CYB0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim13Q9CYB0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trim13Q9CYB0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim13Q9CYB0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim13Q9CYB0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Trim13Q9CYB0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim13Q9CYB0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim13Q9CYB0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.29■□□□□ 0.36
Trim13Q9CYB0 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.29■□□□□ 0.36
Trim13Q9CYB0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim13Q9CYB0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim13Q9CYB0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim13Q9CYB0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim13Q9CYB0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim13Q9CYB0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim13Q9CYB0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim13Q9CYB0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim13Q9CYB0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim13Q9CYB0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.28■□□□□ 0.36
Trim13Q9CYB0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim13Q9CYB0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim13Q9CYB0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim13Q9CYB0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim13Q9CYB0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim13Q9CYB0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim13Q9CYB0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim13Q9CYB0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim13Q9CYB0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim13Q9CYB0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim13Q9CYB0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim13Q9CYB0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim13Q9CYB0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trim13Q9CYB0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim13Q9CYB0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.27■□□□□ 0.36
Trim13Q9CYB0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim13Q9CYB0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim13Q9CYB0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trim13Q9CYB0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim13Q9CYB0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim13Q9CYB0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim13Q9CYB0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim13Q9CYB0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim13Q9CYB0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Trim13Q9CYB0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim13Q9CYB0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim13Q9CYB0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim13Q9CYB0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim13Q9CYB0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim13Q9CYB0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim13Q9CYB0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim13Q9CYB0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim13Q9CYB0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trim13Q9CYB0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim13Q9CYB0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim13Q9CYB0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim13Q9CYB0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim13Q9CYB0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim13Q9CYB0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Trim13Q9CYB0 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.25■□□□□ 0.35
Trim13Q9CYB0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim13Q9CYB0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trim13Q9CYB0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim13Q9CYB0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim13Q9CYB0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim13Q9CYB0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim13Q9CYB0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trim13Q9CYB0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim13Q9CYB0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim13Q9CYB0 Gm22238-201ENSMUST00000175222 88 ntBASIC17.25■□□□□ 0.35
Trim13Q9CYB0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim13Q9CYB0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Trim13Q9CYB0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim13Q9CYB0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim13Q9CYB0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trim13Q9CYB0 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.25■□□□□ 0.35
Trim13Q9CYB0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim13Q9CYB0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Trim13Q9CYB0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trim13Q9CYB0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Trim13Q9CYB0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim13Q9CYB0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim13Q9CYB0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim13Q9CYB0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim13Q9CYB0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Trim13Q9CYB0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim13Q9CYB0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim13Q9CYB0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim13Q9CYB0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim13Q9CYB0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trim13Q9CYB0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim13Q9CYB0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim13Q9CYB0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trim13Q9CYB0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms