Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd1lQ9CXF7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Chd1lQ9CXF7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Chd1lQ9CXF7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd1lQ9CXF7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd1lQ9CXF7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd1lQ9CXF7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd1lQ9CXF7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd1lQ9CXF7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd1lQ9CXF7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Chd1lQ9CXF7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd1lQ9CXF7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Chd1lQ9CXF7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd1lQ9CXF7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd1lQ9CXF7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd1lQ9CXF7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd1lQ9CXF7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Chd1lQ9CXF7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Chd1lQ9CXF7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.14■□□□□ 0.97
Chd1lQ9CXF7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chd1lQ9CXF7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Chd1lQ9CXF7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Chd1lQ9CXF7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chd1lQ9CXF7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chd1lQ9CXF7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Chd1lQ9CXF7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Chd1lQ9CXF7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Chd1lQ9CXF7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd1lQ9CXF7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd1lQ9CXF7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Chd1lQ9CXF7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd1lQ9CXF7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.13■□□□□ 0.97
Chd1lQ9CXF7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd1lQ9CXF7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd1lQ9CXF7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd1lQ9CXF7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Chd1lQ9CXF7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Chd1lQ9CXF7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC21.13■□□□□ 0.97
Chd1lQ9CXF7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd1lQ9CXF7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd1lQ9CXF7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd1lQ9CXF7 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.12■□□□□ 0.97
Chd1lQ9CXF7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.12■□□□□ 0.97
Chd1lQ9CXF7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Chd1lQ9CXF7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Chd1lQ9CXF7 Gm7417-201ENSMUST00000192950 473 ntBASIC21.12■□□□□ 0.97
Chd1lQ9CXF7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd1lQ9CXF7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd1lQ9CXF7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd1lQ9CXF7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd1lQ9CXF7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd1lQ9CXF7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd1lQ9CXF7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chd1lQ9CXF7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd1lQ9CXF7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd1lQ9CXF7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd1lQ9CXF7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Chd1lQ9CXF7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Chd1lQ9CXF7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd1lQ9CXF7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd1lQ9CXF7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chd1lQ9CXF7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd1lQ9CXF7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd1lQ9CXF7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Chd1lQ9CXF7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chd1lQ9CXF7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.1■□□□□ 0.97
Chd1lQ9CXF7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Chd1lQ9CXF7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Chd1lQ9CXF7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd1lQ9CXF7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Chd1lQ9CXF7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd1lQ9CXF7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chd1lQ9CXF7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd1lQ9CXF7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd1lQ9CXF7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd1lQ9CXF7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Chd1lQ9CXF7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Chd1lQ9CXF7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd1lQ9CXF7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd1lQ9CXF7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.09■□□□□ 0.97
Chd1lQ9CXF7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.09■□□□□ 0.97
Chd1lQ9CXF7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.09■□□□□ 0.97
Chd1lQ9CXF7 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.09■□□□□ 0.97
Chd1lQ9CXF7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
Chd1lQ9CXF7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd1lQ9CXF7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd1lQ9CXF7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Chd1lQ9CXF7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd1lQ9CXF7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd1lQ9CXF7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd1lQ9CXF7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd1lQ9CXF7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Chd1lQ9CXF7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Chd1lQ9CXF7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd1lQ9CXF7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd1lQ9CXF7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC21.08■□□□□ 0.97
Chd1lQ9CXF7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Chd1lQ9CXF7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd1lQ9CXF7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd1lQ9CXF7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms