Protein–RNA interactions for Protein: Q9CQC2

Clps, Colipase, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpsQ9CQC2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ClpsQ9CQC2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ClpsQ9CQC2 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.42■□□□□ 0.54
ClpsQ9CQC2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ClpsQ9CQC2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ClpsQ9CQC2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ClpsQ9CQC2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
ClpsQ9CQC2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ClpsQ9CQC2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ClpsQ9CQC2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ClpsQ9CQC2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
ClpsQ9CQC2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ClpsQ9CQC2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.41■□□□□ 0.54
ClpsQ9CQC2 Gm4968-201ENSMUST00000071458 858 ntBASIC18.41■□□□□ 0.54
ClpsQ9CQC2 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.41■□□□□ 0.54
ClpsQ9CQC2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ClpsQ9CQC2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ClpsQ9CQC2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
ClpsQ9CQC2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ClpsQ9CQC2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ClpsQ9CQC2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
ClpsQ9CQC2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ClpsQ9CQC2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ClpsQ9CQC2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ClpsQ9CQC2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ClpsQ9CQC2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.4■□□□□ 0.54
ClpsQ9CQC2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ClpsQ9CQC2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ClpsQ9CQC2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ClpsQ9CQC2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ClpsQ9CQC2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ClpsQ9CQC2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ClpsQ9CQC2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ClpsQ9CQC2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ClpsQ9CQC2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
ClpsQ9CQC2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ClpsQ9CQC2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ClpsQ9CQC2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ClpsQ9CQC2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ClpsQ9CQC2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ClpsQ9CQC2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ClpsQ9CQC2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ClpsQ9CQC2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ClpsQ9CQC2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ClpsQ9CQC2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ClpsQ9CQC2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ClpsQ9CQC2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ClpsQ9CQC2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ClpsQ9CQC2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ClpsQ9CQC2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ClpsQ9CQC2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ClpsQ9CQC2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ClpsQ9CQC2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ClpsQ9CQC2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ClpsQ9CQC2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ClpsQ9CQC2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ClpsQ9CQC2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ClpsQ9CQC2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ClpsQ9CQC2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.38■□□□□ 0.53
ClpsQ9CQC2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ClpsQ9CQC2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClpsQ9CQC2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.37■□□□□ 0.53
ClpsQ9CQC2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClpsQ9CQC2 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.37■□□□□ 0.53
ClpsQ9CQC2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClpsQ9CQC2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClpsQ9CQC2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.37■□□□□ 0.53
ClpsQ9CQC2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClpsQ9CQC2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClpsQ9CQC2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClpsQ9CQC2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ClpsQ9CQC2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ClpsQ9CQC2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ClpsQ9CQC2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ClpsQ9CQC2 Gm5408-201ENSMUST00000197998 747 ntBASIC18.36■□□□□ 0.53
ClpsQ9CQC2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ClpsQ9CQC2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ClpsQ9CQC2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ClpsQ9CQC2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ClpsQ9CQC2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ClpsQ9CQC2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClpsQ9CQC2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClpsQ9CQC2 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.35■□□□□ 0.53
ClpsQ9CQC2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClpsQ9CQC2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.35■□□□□ 0.53
ClpsQ9CQC2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClpsQ9CQC2 Gm12441-201ENSMUST00000121806 588 ntBASIC18.35■□□□□ 0.53
ClpsQ9CQC2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ClpsQ9CQC2 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.35■□□□□ 0.53
ClpsQ9CQC2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ClpsQ9CQC2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClpsQ9CQC2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClpsQ9CQC2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.35■□□□□ 0.53
ClpsQ9CQC2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ClpsQ9CQC2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ClpsQ9CQC2 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.34■□□□□ 0.53
ClpsQ9CQC2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ClpsQ9CQC2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ClpsQ9CQC2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ClpsQ9CQC2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms