Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Chchd1Q9CQA6 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.23□□□□□ -0.13
Chchd1Q9CQA6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chchd1Q9CQA6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chchd1Q9CQA6 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chchd1Q9CQA6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chchd1Q9CQA6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chchd1Q9CQA6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chchd1Q9CQA6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chchd1Q9CQA6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chchd1Q9CQA6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chchd1Q9CQA6 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chchd1Q9CQA6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Chchd1Q9CQA6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Chchd1Q9CQA6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chchd1Q9CQA6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC14.22□□□□□ -0.13
Chchd1Q9CQA6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chchd1Q9CQA6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chchd1Q9CQA6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Chchd1Q9CQA6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chchd1Q9CQA6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chchd1Q9CQA6 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.22□□□□□ -0.13
Chchd1Q9CQA6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chchd1Q9CQA6 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chchd1Q9CQA6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chchd1Q9CQA6 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chchd1Q9CQA6 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.22□□□□□ -0.13
Chchd1Q9CQA6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Chchd1Q9CQA6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chchd1Q9CQA6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Chchd1Q9CQA6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chchd1Q9CQA6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chchd1Q9CQA6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.21□□□□□ -0.13
Chchd1Q9CQA6 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chchd1Q9CQA6 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chchd1Q9CQA6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Chchd1Q9CQA6 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chchd1Q9CQA6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chchd1Q9CQA6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chchd1Q9CQA6 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chchd1Q9CQA6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chchd1Q9CQA6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
Chchd1Q9CQA6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chchd1Q9CQA6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Chchd1Q9CQA6 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chchd1Q9CQA6 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.2□□□□□ -0.14
Chchd1Q9CQA6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chchd1Q9CQA6 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chchd1Q9CQA6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chchd1Q9CQA6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chchd1Q9CQA6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chchd1Q9CQA6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Chchd1Q9CQA6 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Chchd1Q9CQA6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chchd1Q9CQA6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chchd1Q9CQA6 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chchd1Q9CQA6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chchd1Q9CQA6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chchd1Q9CQA6 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chchd1Q9CQA6 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chchd1Q9CQA6 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chchd1Q9CQA6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chchd1Q9CQA6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chchd1Q9CQA6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chchd1Q9CQA6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Chchd1Q9CQA6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Chchd1Q9CQA6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chchd1Q9CQA6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chchd1Q9CQA6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chchd1Q9CQA6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chchd1Q9CQA6 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chchd1Q9CQA6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Chchd1Q9CQA6 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.19□□□□□ -0.14
Chchd1Q9CQA6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chchd1Q9CQA6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chchd1Q9CQA6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chchd1Q9CQA6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chchd1Q9CQA6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chchd1Q9CQA6 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.18□□□□□ -0.14
Chchd1Q9CQA6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chchd1Q9CQA6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chchd1Q9CQA6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.18□□□□□ -0.14
Chchd1Q9CQA6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chchd1Q9CQA6 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chchd1Q9CQA6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chchd1Q9CQA6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Chchd1Q9CQA6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chchd1Q9CQA6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chchd1Q9CQA6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chchd1Q9CQA6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chchd1Q9CQA6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chchd1Q9CQA6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chchd1Q9CQA6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Chchd1Q9CQA6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chchd1Q9CQA6 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Chchd1Q9CQA6 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chchd1Q9CQA6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chchd1Q9CQA6 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.17□□□□□ -0.14
Chchd1Q9CQA6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chchd1Q9CQA6 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms