Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
Trim33Q99PP7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim33Q99PP7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim33Q99PP7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.51■□□□□ 0.55
Trim33Q99PP7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim33Q99PP7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim33Q99PP7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Trim33Q99PP7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim33Q99PP7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim33Q99PP7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim33Q99PP7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim33Q99PP7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim33Q99PP7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim33Q99PP7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim33Q99PP7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim33Q99PP7 Gm42642-201ENSMUST00000200683 355 ntBASIC18.5■□□□□ 0.55
Trim33Q99PP7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.5■□□□□ 0.55
Trim33Q99PP7 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.5■□□□□ 0.55
Trim33Q99PP7 Gm10033-202ENSMUST00000211874 928 ntBASIC18.5■□□□□ 0.55
Trim33Q99PP7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trim33Q99PP7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trim33Q99PP7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim33Q99PP7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim33Q99PP7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim33Q99PP7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim33Q99PP7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.49■□□□□ 0.55
Trim33Q99PP7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim33Q99PP7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim33Q99PP7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim33Q99PP7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Trim33Q99PP7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim33Q99PP7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Trim33Q99PP7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trim33Q99PP7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim33Q99PP7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim33Q99PP7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim33Q99PP7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim33Q99PP7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Trim33Q99PP7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.48■□□□□ 0.55
Trim33Q99PP7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim33Q99PP7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim33Q99PP7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim33Q99PP7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim33Q99PP7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trim33Q99PP7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim33Q99PP7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim33Q99PP7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trim33Q99PP7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim33Q99PP7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim33Q99PP7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.47■□□□□ 0.55
Trim33Q99PP7 Gm18671-201ENSMUST00000214826 683 ntBASIC18.47■□□□□ 0.55
Trim33Q99PP7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.47■□□□□ 0.55
Trim33Q99PP7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim33Q99PP7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim33Q99PP7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim33Q99PP7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.47■□□□□ 0.55
Trim33Q99PP7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim33Q99PP7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim33Q99PP7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim33Q99PP7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim33Q99PP7 Gm13146-201ENSMUST00000118508 780 ntBASIC18.46■□□□□ 0.55
Trim33Q99PP7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim33Q99PP7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.46■□□□□ 0.55
Trim33Q99PP7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim33Q99PP7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.46■□□□□ 0.55
Trim33Q99PP7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim33Q99PP7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim33Q99PP7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim33Q99PP7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim33Q99PP7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Trim33Q99PP7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim33Q99PP7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim33Q99PP7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
Trim33Q99PP7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
Trim33Q99PP7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.45■□□□□ 0.54
Trim33Q99PP7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim33Q99PP7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim33Q99PP7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim33Q99PP7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim33Q99PP7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.45■□□□□ 0.54
Trim33Q99PP7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim33Q99PP7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim33Q99PP7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.45■□□□□ 0.54
Trim33Q99PP7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim33Q99PP7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim33Q99PP7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim33Q99PP7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
Trim33Q99PP7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trim33Q99PP7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Trim33Q99PP7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trim33Q99PP7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trim33Q99PP7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim33Q99PP7 Gm26571-201ENSMUST00000181399 666 ntBASIC18.44■□□□□ 0.54
Trim33Q99PP7 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.44■□□□□ 0.54
Trim33Q99PP7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim33Q99PP7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim33Q99PP7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trim33Q99PP7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim33Q99PP7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
Trim33Q99PP7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms