Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Raf1Q99N57 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Raf1Q99N57 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Raf1Q99N57 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.77■□□□□ 0.27
Raf1Q99N57 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Raf1Q99N57 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Raf1Q99N57 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Raf1Q99N57 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Raf1Q99N57 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Raf1Q99N57 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Raf1Q99N57 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Raf1Q99N57 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Raf1Q99N57 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Raf1Q99N57 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.76■□□□□ 0.27
Raf1Q99N57 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Raf1Q99N57 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Raf1Q99N57 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Raf1Q99N57 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Raf1Q99N57 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Raf1Q99N57 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Raf1Q99N57 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Raf1Q99N57 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Raf1Q99N57 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Raf1Q99N57 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Raf1Q99N57 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Raf1Q99N57 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Raf1Q99N57 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Raf1Q99N57 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Raf1Q99N57 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.75■□□□□ 0.27
Raf1Q99N57 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Raf1Q99N57 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.75■□□□□ 0.27
Raf1Q99N57 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Raf1Q99N57 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.75■□□□□ 0.27
Raf1Q99N57 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.75■□□□□ 0.27
Raf1Q99N57 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Raf1Q99N57 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Raf1Q99N57 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Raf1Q99N57 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Raf1Q99N57 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Raf1Q99N57 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Raf1Q99N57 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Raf1Q99N57 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Raf1Q99N57 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Raf1Q99N57 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Raf1Q99N57 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Raf1Q99N57 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Raf1Q99N57 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Raf1Q99N57 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Raf1Q99N57 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Raf1Q99N57 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Raf1Q99N57 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Raf1Q99N57 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Raf1Q99N57 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Raf1Q99N57 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Raf1Q99N57 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Raf1Q99N57 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Raf1Q99N57 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Raf1Q99N57 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Raf1Q99N57 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Raf1Q99N57 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.73■□□□□ 0.27
Raf1Q99N57 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Raf1Q99N57 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.73■□□□□ 0.27
Raf1Q99N57 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Raf1Q99N57 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Raf1Q99N57 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Raf1Q99N57 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Raf1Q99N57 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Raf1Q99N57 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Raf1Q99N57 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Raf1Q99N57 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Raf1Q99N57 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Raf1Q99N57 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Raf1Q99N57 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Raf1Q99N57 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.72■□□□□ 0.27
Raf1Q99N57 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.72■□□□□ 0.27
Raf1Q99N57 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Raf1Q99N57 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Raf1Q99N57 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Raf1Q99N57 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Raf1Q99N57 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Raf1Q99N57 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.72■□□□□ 0.27
Raf1Q99N57 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.72■□□□□ 0.27
Raf1Q99N57 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Raf1Q99N57 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Raf1Q99N57 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.72■□□□□ 0.27
Raf1Q99N57 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Raf1Q99N57 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Raf1Q99N57 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Raf1Q99N57 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Raf1Q99N57 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Raf1Q99N57 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Raf1Q99N57 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Raf1Q99N57 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Raf1Q99N57 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Raf1Q99N57 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Raf1Q99N57 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Raf1Q99N57 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.71■□□□□ 0.27
Raf1Q99N57 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Raf1Q99N57 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Raf1Q99N57 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms