Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lysmd3Q99LE3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.44■□□□□ 0.7
Lysmd3Q99LE3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Lysmd3Q99LE3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Lysmd3Q99LE3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.44■□□□□ 0.7
Lysmd3Q99LE3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Lysmd3Q99LE3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.44■□□□□ 0.7
Lysmd3Q99LE3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.44■□□□□ 0.7
Lysmd3Q99LE3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lysmd3Q99LE3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Lysmd3Q99LE3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Lysmd3Q99LE3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lysmd3Q99LE3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lysmd3Q99LE3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.44■□□□□ 0.7
Lysmd3Q99LE3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd3Q99LE3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Lysmd3Q99LE3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd3Q99LE3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.43■□□□□ 0.7
Lysmd3Q99LE3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd3Q99LE3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd3Q99LE3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Lysmd3Q99LE3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd3Q99LE3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd3Q99LE3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Lysmd3Q99LE3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd3Q99LE3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd3Q99LE3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd3Q99LE3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd3Q99LE3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd3Q99LE3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd3Q99LE3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd3Q99LE3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd3Q99LE3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd3Q99LE3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Lysmd3Q99LE3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.42■□□□□ 0.7
Lysmd3Q99LE3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd3Q99LE3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd3Q99LE3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Lysmd3Q99LE3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd3Q99LE3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd3Q99LE3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd3Q99LE3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd3Q99LE3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd3Q99LE3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd3Q99LE3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Lysmd3Q99LE3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.41■□□□□ 0.7
Lysmd3Q99LE3 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.41■□□□□ 0.7
Lysmd3Q99LE3 Gm5408-201ENSMUST00000197998 747 ntBASIC19.41■□□□□ 0.7
Lysmd3Q99LE3 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.41■□□□□ 0.7
Lysmd3Q99LE3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Lysmd3Q99LE3 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.41■□□□□ 0.7
Lysmd3Q99LE3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd3Q99LE3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Lysmd3Q99LE3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd3Q99LE3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd3Q99LE3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Lysmd3Q99LE3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd3Q99LE3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd3Q99LE3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Lysmd3Q99LE3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd3Q99LE3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd3Q99LE3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd3Q99LE3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd3Q99LE3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd3Q99LE3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd3Q99LE3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd3Q99LE3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd3Q99LE3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd3Q99LE3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.4■□□□□ 0.7
Lysmd3Q99LE3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd3Q99LE3 Gm4968-201ENSMUST00000071458 858 ntBASIC19.4■□□□□ 0.7
Lysmd3Q99LE3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.4■□□□□ 0.7
Lysmd3Q99LE3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd3Q99LE3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd3Q99LE3 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.4■□□□□ 0.7
Lysmd3Q99LE3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.4■□□□□ 0.7
Lysmd3Q99LE3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd3Q99LE3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd3Q99LE3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Lysmd3Q99LE3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lysmd3Q99LE3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lysmd3Q99LE3 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.39■□□□□ 0.69
Lysmd3Q99LE3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lysmd3Q99LE3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lysmd3Q99LE3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lysmd3Q99LE3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lysmd3Q99LE3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lysmd3Q99LE3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Lysmd3Q99LE3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lysmd3Q99LE3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lysmd3Q99LE3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lysmd3Q99LE3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lysmd3Q99LE3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lysmd3Q99LE3 Gm12441-201ENSMUST00000121806 588 ntBASIC19.38■□□□□ 0.69
Lysmd3Q99LE3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.38■□□□□ 0.69
Lysmd3Q99LE3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.38■□□□□ 0.69
Lysmd3Q99LE3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lysmd3Q99LE3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.38■□□□□ 0.69
Lysmd3Q99LE3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lysmd3Q99LE3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms