Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha1Q91Y21 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha1Q91Y21 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha1Q91Y21 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha1Q91Y21 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha1Q91Y21 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha1Q91Y21 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha1Q91Y21 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha1Q91Y21 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.54■□□□□ 0.72
Pcdha1Q91Y21 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Pcdha1Q91Y21 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Pcdha1Q91Y21 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha1Q91Y21 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha1Q91Y21 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha1Q91Y21 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha1Q91Y21 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Pcdha1Q91Y21 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Pcdha1Q91Y21 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha1Q91Y21 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha1Q91Y21 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha1Q91Y21 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha1Q91Y21 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha1Q91Y21 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha1Q91Y21 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha1Q91Y21 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha1Q91Y21 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha1Q91Y21 Gm5408-201ENSMUST00000197998 747 ntBASIC19.53■□□□□ 0.72
Pcdha1Q91Y21 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Pcdha1Q91Y21 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Pcdha1Q91Y21 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha1Q91Y21 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.53■□□□□ 0.72
Pcdha1Q91Y21 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha1Q91Y21 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha1Q91Y21 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha1Q91Y21 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Pcdha1Q91Y21 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha1Q91Y21 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Pcdha1Q91Y21 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.52■□□□□ 0.72
Pcdha1Q91Y21 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdha1Q91Y21 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdha1Q91Y21 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdha1Q91Y21 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdha1Q91Y21 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdha1Q91Y21 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.52■□□□□ 0.72
Pcdha1Q91Y21 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.52■□□□□ 0.72
Pcdha1Q91Y21 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdha1Q91Y21 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdha1Q91Y21 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdha1Q91Y21 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
Pcdha1Q91Y21 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdha1Q91Y21 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Pcdha1Q91Y21 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Pcdha1Q91Y21 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha1Q91Y21 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha1Q91Y21 Gm12527-201ENSMUST00000117967 564 ntBASIC19.51■□□□□ 0.71
Pcdha1Q91Y21 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.51■□□□□ 0.71
Pcdha1Q91Y21 Gm10653-202ENSMUST00000139570 835 ntBASIC19.51■□□□□ 0.71
Pcdha1Q91Y21 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha1Q91Y21 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha1Q91Y21 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha1Q91Y21 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha1Q91Y21 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha1Q91Y21 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Pcdha1Q91Y21 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha1Q91Y21 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha1Q91Y21 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Pcdha1Q91Y21 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Pcdha1Q91Y21 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha1Q91Y21 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Pcdha1Q91Y21 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdha1Q91Y21 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.5■□□□□ 0.71
Pcdha1Q91Y21 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Pcdha1Q91Y21 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.5■□□□□ 0.71
Pcdha1Q91Y21 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdha1Q91Y21 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdha1Q91Y21 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdha1Q91Y21 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdha1Q91Y21 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdha1Q91Y21 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdha1Q91Y21 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdha1Q91Y21 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha1Q91Y21 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha1Q91Y21 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha1Q91Y21 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha1Q91Y21 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha1Q91Y21 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.49■□□□□ 0.71
Pcdha1Q91Y21 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Pcdha1Q91Y21 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Pcdha1Q91Y21 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha1Q91Y21 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha1Q91Y21 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha1Q91Y21 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.49■□□□□ 0.71
Pcdha1Q91Y21 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.49■□□□□ 0.71
Pcdha1Q91Y21 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Pcdha1Q91Y21 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha1Q91Y21 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Pcdha1Q91Y21 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha1Q91Y21 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha1Q91Y21 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha1Q91Y21 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms