Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhga4Q91XY4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pcdhga4Q91XY4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdhga4Q91XY4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga4Q91XY4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.37■□□□□ 0.53
Pcdhga4Q91XY4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.37■□□□□ 0.53
Pcdhga4Q91XY4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdhga4Q91XY4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga4Q91XY4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga4Q91XY4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhga4Q91XY4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga4Q91XY4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga4Q91XY4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.37■□□□□ 0.53
Pcdhga4Q91XY4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga4Q91XY4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga4Q91XY4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga4Q91XY4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga4Q91XY4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.36■□□□□ 0.53
Pcdhga4Q91XY4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga4Q91XY4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.36■□□□□ 0.53
Pcdhga4Q91XY4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga4Q91XY4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga4Q91XY4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga4Q91XY4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga4Q91XY4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga4Q91XY4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga4Q91XY4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga4Q91XY4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdhga4Q91XY4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga4Q91XY4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga4Q91XY4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga4Q91XY4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga4Q91XY4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga4Q91XY4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga4Q91XY4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga4Q91XY4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga4Q91XY4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga4Q91XY4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga4Q91XY4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga4Q91XY4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga4Q91XY4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga4Q91XY4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga4Q91XY4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhga4Q91XY4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga4Q91XY4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga4Q91XY4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga4Q91XY4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.34■□□□□ 0.53
Pcdhga4Q91XY4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga4Q91XY4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga4Q91XY4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga4Q91XY4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhga4Q91XY4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhga4Q91XY4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.33■□□□□ 0.53
Pcdhga4Q91XY4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhga4Q91XY4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhga4Q91XY4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhga4Q91XY4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhga4Q91XY4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhga4Q91XY4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhga4Q91XY4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhga4Q91XY4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhga4Q91XY4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdhga4Q91XY4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Pcdhga4Q91XY4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhga4Q91XY4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdhga4Q91XY4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhga4Q91XY4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhga4Q91XY4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga4Q91XY4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga4Q91XY4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga4Q91XY4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga4Q91XY4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga4Q91XY4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga4Q91XY4 Gm13146-201ENSMUST00000118508 780 ntBASIC18.32■□□□□ 0.52
Pcdhga4Q91XY4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga4Q91XY4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga4Q91XY4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga4Q91XY4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhga4Q91XY4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga4Q91XY4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.32■□□□□ 0.52
Pcdhga4Q91XY4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga4Q91XY4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhga4Q91XY4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga4Q91XY4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga4Q91XY4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga4Q91XY4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga4Q91XY4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Pcdhga4Q91XY4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdhga4Q91XY4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga4Q91XY4 Gm7514-201ENSMUST00000209475 934 ntBASIC18.31■□□□□ 0.52
Pcdhga4Q91XY4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga4Q91XY4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga4Q91XY4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdhga4Q91XY4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga4Q91XY4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga4Q91XY4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga4Q91XY4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Pcdhga4Q91XY4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.3■□□□□ 0.52
Pcdhga4Q91XY4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga4Q91XY4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms