Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Tram1Q91V04 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tram1Q91V04 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Tram1Q91V04 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tram1Q91V04 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tram1Q91V04 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tram1Q91V04 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Tram1Q91V04 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tram1Q91V04 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tram1Q91V04 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tram1Q91V04 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tram1Q91V04 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tram1Q91V04 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.15■□□□□ 0.18
Tram1Q91V04 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Tram1Q91V04 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tram1Q91V04 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.15■□□□□ 0.18
Tram1Q91V04 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tram1Q91V04 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tram1Q91V04 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tram1Q91V04 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tram1Q91V04 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Tram1Q91V04 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tram1Q91V04 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tram1Q91V04 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tram1Q91V04 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.18
Tram1Q91V04 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tram1Q91V04 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Tram1Q91V04 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tram1Q91V04 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tram1Q91V04 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tram1Q91V04 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tram1Q91V04 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tram1Q91V04 Gm5921-201ENSMUST00000075898 882 ntBASIC16.14■□□□□ 0.17
Tram1Q91V04 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tram1Q91V04 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tram1Q91V04 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tram1Q91V04 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tram1Q91V04 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tram1Q91V04 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.14■□□□□ 0.17
Tram1Q91V04 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Tram1Q91V04 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Tram1Q91V04 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tram1Q91V04 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tram1Q91V04 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tram1Q91V04 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tram1Q91V04 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tram1Q91V04 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tram1Q91V04 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tram1Q91V04 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.13■□□□□ 0.17
Tram1Q91V04 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.13■□□□□ 0.17
Tram1Q91V04 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tram1Q91V04 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tram1Q91V04 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tram1Q91V04 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tram1Q91V04 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tram1Q91V04 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tram1Q91V04 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tram1Q91V04 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tram1Q91V04 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tram1Q91V04 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tram1Q91V04 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tram1Q91V04 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.12■□□□□ 0.17
Tram1Q91V04 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tram1Q91V04 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Tram1Q91V04 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.12■□□□□ 0.17
Tram1Q91V04 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Tram1Q91V04 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tram1Q91V04 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tram1Q91V04 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tram1Q91V04 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tram1Q91V04 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tram1Q91V04 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tram1Q91V04 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tram1Q91V04 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tram1Q91V04 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tram1Q91V04 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tram1Q91V04 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tram1Q91V04 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tram1Q91V04 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Tram1Q91V04 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tram1Q91V04 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tram1Q91V04 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tram1Q91V04 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Tram1Q91V04 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tram1Q91V04 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tram1Q91V04 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tram1Q91V04 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tram1Q91V04 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.1■□□□□ 0.17
Tram1Q91V04 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tram1Q91V04 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Tram1Q91V04 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.1■□□□□ 0.17
Tram1Q91V04 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Tram1Q91V04 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tram1Q91V04 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tram1Q91V04 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tram1Q91V04 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.09■□□□□ 0.17
Tram1Q91V04 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tram1Q91V04 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tram1Q91V04 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tram1Q91V04 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms