Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lmcd1Q8VEE1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lmcd1Q8VEE1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.04■□□□□ 0.8
Lmcd1Q8VEE1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.04■□□□□ 0.8
Lmcd1Q8VEE1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Lmcd1Q8VEE1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Lmcd1Q8VEE1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.04■□□□□ 0.8
Lmcd1Q8VEE1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lmcd1Q8VEE1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lmcd1Q8VEE1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lmcd1Q8VEE1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lmcd1Q8VEE1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Lmcd1Q8VEE1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Lmcd1Q8VEE1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Lmcd1Q8VEE1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lmcd1Q8VEE1 Gm7889-201ENSMUST00000185591 958 ntBASIC20.03■□□□□ 0.8
Lmcd1Q8VEE1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.03■□□□□ 0.8
Lmcd1Q8VEE1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lmcd1Q8VEE1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Lmcd1Q8VEE1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Lmcd1Q8VEE1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lmcd1Q8VEE1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lmcd1Q8VEE1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Lmcd1Q8VEE1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Lmcd1Q8VEE1 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.02■□□□□ 0.8
Lmcd1Q8VEE1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.02■□□□□ 0.8
Lmcd1Q8VEE1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Lmcd1Q8VEE1 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.02■□□□□ 0.8
Lmcd1Q8VEE1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Lmcd1Q8VEE1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lmcd1Q8VEE1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lmcd1Q8VEE1 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.02■□□□□ 0.79
Lmcd1Q8VEE1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.02■□□□□ 0.79
Lmcd1Q8VEE1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Lmcd1Q8VEE1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lmcd1Q8VEE1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lmcd1Q8VEE1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lmcd1Q8VEE1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lmcd1Q8VEE1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lmcd1Q8VEE1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.01■□□□□ 0.79
Lmcd1Q8VEE1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lmcd1Q8VEE1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lmcd1Q8VEE1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lmcd1Q8VEE1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Lmcd1Q8VEE1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lmcd1Q8VEE1 Hsf1-207ENSMUST00000228371 2102 ntBASIC20■□□□□ 0.79
Lmcd1Q8VEE1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lmcd1Q8VEE1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Lmcd1Q8VEE1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lmcd1Q8VEE1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lmcd1Q8VEE1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lmcd1Q8VEE1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lmcd1Q8VEE1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20■□□□□ 0.79
Lmcd1Q8VEE1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lmcd1Q8VEE1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Lmcd1Q8VEE1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20■□□□□ 0.79
Lmcd1Q8VEE1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lmcd1Q8VEE1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Lmcd1Q8VEE1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lmcd1Q8VEE1 Gm23634-201ENSMUST00000175071 91 ntBASIC20■□□□□ 0.79
Lmcd1Q8VEE1 Gm43183-201ENSMUST00000200632 547 ntBASIC20■□□□□ 0.79
Lmcd1Q8VEE1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lmcd1Q8VEE1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lmcd1Q8VEE1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lmcd1Q8VEE1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lmcd1Q8VEE1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lmcd1Q8VEE1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lmcd1Q8VEE1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lmcd1Q8VEE1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lmcd1Q8VEE1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lmcd1Q8VEE1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lmcd1Q8VEE1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lmcd1Q8VEE1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.98■□□□□ 0.79
Lmcd1Q8VEE1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Lmcd1Q8VEE1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lmcd1Q8VEE1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lmcd1Q8VEE1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Lmcd1Q8VEE1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Lmcd1Q8VEE1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lmcd1Q8VEE1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lmcd1Q8VEE1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lmcd1Q8VEE1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Lmcd1Q8VEE1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lmcd1Q8VEE1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lmcd1Q8VEE1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.97■□□□□ 0.79
Lmcd1Q8VEE1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lmcd1Q8VEE1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lmcd1Q8VEE1 Gm33142-201ENSMUST00000193913 867 ntBASIC19.97■□□□□ 0.79
Lmcd1Q8VEE1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Lmcd1Q8VEE1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.97■□□□□ 0.79
Lmcd1Q8VEE1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Lmcd1Q8VEE1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lmcd1Q8VEE1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lmcd1Q8VEE1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lmcd1Q8VEE1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Lmcd1Q8VEE1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lmcd1Q8VEE1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Lmcd1Q8VEE1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.96■□□□□ 0.79
Lmcd1Q8VEE1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Lmcd1Q8VEE1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms