Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.24■□□□□ 0.51
Q8VDP2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Q8VDP2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Q8VDP2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Q8VDP2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Q8VDP2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.24■□□□□ 0.51
Q8VDP2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Q8VDP2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Q8VDP2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.24■□□□□ 0.51
Q8VDP2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Q8VDP2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Q8VDP2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Q8VDP2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Q8VDP2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.23■□□□□ 0.51
Q8VDP2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Q8VDP2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Q8VDP2 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.23■□□□□ 0.51
Q8VDP2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Q8VDP2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q8VDP2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q8VDP2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q8VDP2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Q8VDP2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Q8VDP2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q8VDP2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q8VDP2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Q8VDP2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q8VDP2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q8VDP2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q8VDP2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Q8VDP2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Q8VDP2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Q8VDP2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Q8VDP2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Q8VDP2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Q8VDP2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Q8VDP2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Q8VDP2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.21■□□□□ 0.51
Q8VDP2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Q8VDP2 Gm5921-201ENSMUST00000075898 882 ntBASIC18.21■□□□□ 0.51
Q8VDP2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Q8VDP2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Q8VDP2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Q8VDP2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Q8VDP2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Q8VDP2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Q8VDP2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Q8VDP2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Q8VDP2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Q8VDP2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Q8VDP2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Q8VDP2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Q8VDP2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
Q8VDP2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Q8VDP2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.2■□□□□ 0.5
Q8VDP2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q8VDP2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Q8VDP2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q8VDP2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q8VDP2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.2■□□□□ 0.5
Q8VDP2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q8VDP2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q8VDP2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Q8VDP2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.2■□□□□ 0.5
Q8VDP2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
Q8VDP2 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.2■□□□□ 0.5
Q8VDP2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Q8VDP2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q8VDP2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q8VDP2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q8VDP2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q8VDP2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q8VDP2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q8VDP2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q8VDP2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Q8VDP2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Q8VDP2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q8VDP2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Q8VDP2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q8VDP2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Q8VDP2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Q8VDP2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Q8VDP2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q8VDP2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q8VDP2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.19■□□□□ 0.5
Q8VDP2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q8VDP2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q8VDP2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q8VDP2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q8VDP2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Q8VDP2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Q8VDP2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Q8VDP2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Q8VDP2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Q8VDP2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Q8VDP2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Q8VDP2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Q8VDP2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Q8VDP2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Q8VDP2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms