Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC24.74■■□□□ 1.55
Ddx54Q8K4L0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
Ddx54Q8K4L0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Ddx54Q8K4L0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Ddx54Q8K4L0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ddx54Q8K4L0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ddx54Q8K4L0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC24.73■■□□□ 1.55
Ddx54Q8K4L0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Ddx54Q8K4L0 Gm20100-201ENSMUST00000209418 2272 ntBASIC24.72■■□□□ 1.55
Ddx54Q8K4L0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ddx54Q8K4L0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC24.72■■□□□ 1.55
Ddx54Q8K4L0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Ddx54Q8K4L0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC24.72■■□□□ 1.55
Ddx54Q8K4L0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Ddx54Q8K4L0 Gm19094-201ENSMUST00000209791 1246 ntBASIC24.72■■□□□ 1.55
Ddx54Q8K4L0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ddx54Q8K4L0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ddx54Q8K4L0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Ddx54Q8K4L0 Gm18101-201ENSMUST00000215769 548 ntBASIC24.71■■□□□ 1.55
Ddx54Q8K4L0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ddx54Q8K4L0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ddx54Q8K4L0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC24.71■■□□□ 1.55
Ddx54Q8K4L0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ddx54Q8K4L0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ddx54Q8K4L0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ddx54Q8K4L0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
Ddx54Q8K4L0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Ddx54Q8K4L0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ddx54Q8K4L0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC24.7■■□□□ 1.54
Ddx54Q8K4L0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Ddx54Q8K4L0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ddx54Q8K4L0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Ddx54Q8K4L0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC24.69■■□□□ 1.54
Ddx54Q8K4L0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ddx54Q8K4L0 Gm32699-201ENSMUST00000221728 1988 ntBASIC24.69■■□□□ 1.54
Ddx54Q8K4L0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ddx54Q8K4L0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC24.69■■□□□ 1.54
Ddx54Q8K4L0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Ddx54Q8K4L0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
Ddx54Q8K4L0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ddx54Q8K4L0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ddx54Q8K4L0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ddx54Q8K4L0 Otx2os1-204ENSMUST00000227221 751 ntBASIC24.68■■□□□ 1.54
Ddx54Q8K4L0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ddx54Q8K4L0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ddx54Q8K4L0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Ddx54Q8K4L0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Ddx54Q8K4L0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ddx54Q8K4L0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ddx54Q8K4L0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ddx54Q8K4L0 Gm17641-201ENSMUST00000166328 2350 ntBASIC24.67■■□□□ 1.54
Ddx54Q8K4L0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ddx54Q8K4L0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC24.67■■□□□ 1.54
Ddx54Q8K4L0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ddx54Q8K4L0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ddx54Q8K4L0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ddx54Q8K4L0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Ddx54Q8K4L0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ddx54Q8K4L0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ddx54Q8K4L0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ddx54Q8K4L0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC24.66■■□□□ 1.54
Ddx54Q8K4L0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ddx54Q8K4L0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ddx54Q8K4L0 Gm10013-201ENSMUST00000106074 672 ntBASIC24.66■■□□□ 1.54
Ddx54Q8K4L0 Gm6345-202ENSMUST00000180900 204 ntBASIC24.66■■□□□ 1.54
Ddx54Q8K4L0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ddx54Q8K4L0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC24.66■■□□□ 1.54
Ddx54Q8K4L0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Ddx54Q8K4L0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ddx54Q8K4L0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ddx54Q8K4L0 Gm14464-201ENSMUST00000119658 1254 ntBASIC24.65■■□□□ 1.54
Ddx54Q8K4L0 Gm33142-201ENSMUST00000193913 867 ntBASIC24.65■■□□□ 1.54
Ddx54Q8K4L0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC24.65■■□□□ 1.54
Ddx54Q8K4L0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC24.65■■□□□ 1.54
Ddx54Q8K4L0 Odf3b-204ENSMUST00000227834 930 ntBASIC24.65■■□□□ 1.54
Ddx54Q8K4L0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Ddx54Q8K4L0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ddx54Q8K4L0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC24.65■■□□□ 1.54
Ddx54Q8K4L0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Ddx54Q8K4L0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ddx54Q8K4L0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Ddx54Q8K4L0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Ddx54Q8K4L0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC24.64■■□□□ 1.54
Ddx54Q8K4L0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC24.64■■□□□ 1.54
Ddx54Q8K4L0 Gm3375-201ENSMUST00000203929 796 ntBASIC24.64■■□□□ 1.54
Ddx54Q8K4L0 AC159205.6-201ENSMUST00000224935 887 ntBASIC24.64■■□□□ 1.54
Ddx54Q8K4L0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
Ddx54Q8K4L0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
Ddx54Q8K4L0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
Ddx54Q8K4L0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ddx54Q8K4L0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ddx54Q8K4L0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ddx54Q8K4L0 Gm9103-201ENSMUST00000119371 405 ntBASIC24.63■■□□□ 1.53
Ddx54Q8K4L0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Ddx54Q8K4L0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC24.63■■□□□ 1.53
Ddx54Q8K4L0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Ddx54Q8K4L0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC24.63■■□□□ 1.53
Ddx54Q8K4L0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ddx54Q8K4L0 AA414768-201ENSMUST00000121924 1257 ntBASIC24.62■■□□□ 1.53
Ddx54Q8K4L0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms